Pseudodesulfovibrio sediminis: PSDVSF_35330
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Entry
PSDVSF_35330 CDS
T08380
Name
(GenBank) transcriptional regulator
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00860
Porphyrin metabolism
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
psef01240
Biosynthesis of cofactors
Module
psef_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSDVSF_35330
Enzymes [BR:
psef01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
PSDVSF_35330
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GFIT
Motif
Pfam:
AsnC_trans_reg2
HTH_AsnC-type
HTH_24
AsnC_trans_reg
Sigma70_r4
Lipocalin_7
Motif
Other DBs
NCBI-ProteinID:
BCS90291
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Position
complement(3746450..3746899)
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AA seq
149 aa
AA seq
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MDSYDKQILDIIQSHFPLASRPYEEVGKQVGLSEDEVLERVRDLKKSGLIRRMGANFTSK
ALGWQSTLCAASVPDDKIDEFVAEVNKHDGVTHNYLRENEFNIWFALIAPDMDAVEAILA
SITEATGIKVLNLPADKLFKIKVDFKMDK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggattcctacgacaagcagattctggatatcattcagtcccacttccccctggcttcc
cgcccgtatgaggaagtcggcaagcaggtggggctttccgaagacgaagtgctggagcgc
gtgcgcgacctgaagaaatcaggactgatccgacgcatgggcgccaacttcacgtccaag
gctttgggatggcagtccaccctgtgtgcggcatccgttccggacgacaagatcgacgag
ttcgtggccgaagtgaacaagcacgatggcgtcacgcacaattatctgcgtgaaaacgaa
ttcaacatctggttcgcgctcatcgccccggacatggacgcagtggaggccatcctcgca
tccatcaccgaggccacaggcatcaaggtgctgaacctgcctgcggacaagctgttcaag
atcaaagtcgacttcaagatggacaaataa
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