Pseudactinotalea sp. HY158: GCE65_13505
Help
Entry
GCE65_13505 CDS
T06271
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
psei
Pseudactinotalea sp. HY158
Pathway
psei00300
Lysine biosynthesis
psei00470
D-Amino acid metabolism
psei00550
Peptidoglycan biosynthesis
psei01100
Metabolic pathways
psei01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCE65_13505 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCE65_13505 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCE65_13505 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GCE65_13505 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psei01011
]
GCE65_13505 (alr)
Enzymes [BR:
psei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
GCE65_13505 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
GCE65_13505 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
psei01011
]
Precursor biosynthesis
Amino acid ligase
GCE65_13505 (alr)
Racemase
GCE65_13505 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
YjeF_N
TsaE
Carb_kinase
AAA_25
AAA_28
ABC_tran
AAA_19
MoCF_biosynth
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGH70392
UniProt:
A0A5Q2VXU1
LinkDB
All DBs
Position
complement(3081688..3085206)
Genome browser
AA seq
1172 aa
AA seq
DB search
MSAVPGSSGPVAAYAAEHVRAAEAPLLAAGVPLMRRAAAALAETVRAELPPGTGVLVIAG
RGNNGGDGLFAAAELARAGIAVTVALAQPIEPTDDAAHRPMSAAEPGPGQGLAAARREGA
VIVPLWYAGETLPGTLDQADPADPADPADPADPADQADPSDPDGAGSPRWSALDEAAAGA
AVWIDALTGLGLRPPLRGRLGDLLAHLLALRRRHRPIVVAADLPSGMAADSGALTGPVLP
ADVTVTFGCAKPALLLAPACHAAGRVEVVDLGLTEELAALPVAVRRLDGARLGAEWPAPG
PGDHKYTRGVVGVIAGSATYPGAAVLCTGAAIRAGAGMVRYLGSATASVLAARPEAVTAP
GRVQSWVIGPGLPGLGDESGDLGDPGSPADPDMAAALGAATEAIAAGAALVLDAGGLDLL
TPGEASAEGETARRTRIGGRILHDRVLLTPHAGELARLLTRFGVEAGREQIEADPAHWAA
RAAEATGATVLLKGAVTLVAAPAPGAGGAASTIPLYSQRTTPLARNRRQRRRALAGVLGT
ALAQLPPQRRGGHGPGVRDGRRSTAAPACWPARATTAARSPPPTSSAPCPVPSVPCCASR
AGNRRAGSWQTRGVSYPGYTAAAHVDLGAIRSNIRRIRSLAAPAEVMAVVKADAYGHGLV
PVARAARQAGATWLGVAQLAEALRLREAGLEGRILAWLWTPGSDLLADCLAADIDLSVPD
VRALAEVAGHVRARTAAGGSDRPARIHLEVDTGMGRTGLVLEEFGSLIEAARAAEDAGEV
RIVGVWTHLARADETGDADAVRFTDRQYERFASACAALAAAGAQLEVRHIANSAGVVTTR
EPYDLVRAGLITYGISPLTHETPADLGLRPALRLTAPLAMVKHLPAGHGVSYGGTYVTAA
DTRIGVVPLGYGDGIPRHGSNVAPVLVAGERRTIAGRVCMDQFMVDLGGSGHVDAAAGTE
AVLLGDALRGEPTPREWADAIGTIDYEIVTRLGARIPRIYTGDDEGTTPPMLTIPLPDAA
ATTALGIRLAPHLRAGDLVVLTGGLGAGKTTLTQGLGAALEVEGQVASPTFIIAREHPGP
RVGLVHVDAYRLTSLAEVDQLDLDASLEDSVTVVEWGEGLVEDLAESRLEIALTRPRGDA
ADLVRTARIEAFGPRWAGEDWSDLATSRPDVD
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgcccgggtcgagtgggcccgtggccgcctatgcggccgagcacgtccga
gccgccgaggccccgttgctggccgccggcgtgccgctcatgcgccgagcggccgccgcg
ctcgcggagacggtccgcgccgaactcccgcccgggacgggcgtgctcgtcatcgccggc
cgcggcaacaacggcggcgacggcctgttcgcggccgccgagctcgcgcgcgcgggcatc
gccgtgaccgtcgcgctcgcccagccgatcgagccgacggacgacgcagctcaccggccg
atgtccgccgccgaacccgggcccgggcaggggctcgctgcggcccgccgcgagggggcg
gtgatcgtccccctctggtacgcgggcgagacgctccccggcacactcgatcaggccgac
ccggccgatccggccgatccggccgatccggccgatccggccgatcaggccgacccgtcc
gatccggacggggcggggtccccccgctggtccgccctcgatgaggccgcggccggtgcc
gcggtgtggatcgacgcgctcaccgggctcggcctgcgtcccccgctgcggggccggctc
ggcgaccttctcgcgcacctgctcgccctgcgccgtcggcaccggccgatcgtggtggcc
gccgacctgccctccggcatggcggccgactccggcgcgctcaccggcccggtgctgccg
gccgacgtcaccgtcacgttcgggtgtgcgaagcccgcgctgctgttggctcccgcctgc
cacgccgcgggccgcgtcgaggtggtggacctgggcctgaccgaggagctcgcggccctg
cccgtggccgtgcgccgcctcgacggtgcccggctcggcgcggagtggcccgcccccggc
ccgggcgaccacaagtacacccggggcgtcgtcggcgtcatcgcgggctcggccacgtac
ccgggcgccgccgtgctgtgcaccggcgccgcgatccgcgccggggcgggcatggtccgc
tacctcgggtcggccaccgcgtcggtgctcgccgcccggccggaggccgtcaccgcgccc
gggcgcgtgcagtcctgggtcatcggccccggcctgcccggcctgggcgatgagtcgggc
gacctcggcgaccctgggagccccgccgaccccgacatggccgccgcccttggtgccgcg
accgaggcgatcgccgccggcgcggccctcgtgctcgacgccggcgggctcgacctgctc
accccgggggaggcgagcgcggagggtgagacggcccggcgcacccggatcggcgggcgc
atcctgcacgaccgggtcctgctcaccccgcacgcgggcgagctcgcccgcctgctcacc
cgcttcggcgtcgaggcgggccgcgagcagatcgaggccgacccggctcactgggcggcc
agggccgccgaggcgaccggcgccacggtgctgctcaagggggccgtgacgctcgtggcc
gccccggcccccggcgcgggcggcgcagcgagcacgatccccctctactcccagcggacc
acacccctggctcgcaaccgccggcagcggcgacgtgctctcgccggggtcctcggcacc
gcgctcgcccagttgccgccccagcgccgaggcggccacggcccgggcgtccgcgatggg
cggcgatccacggccgcgccggcgtgctggccggcgcgcgccacgacggcggcccgatcg
ccgccgccgacatcgtcggcgccgtgccctgtgccatcggtgccgtgttgcgcctcgcgc
gcggggaatcggcgggcggggtcctggcagactaggggcgtgagctaccccgggtacacc
gcagccgcccacgtcgacctgggcgcgatccggagcaatatccgccgcatccgttcactc
gccgcccccgccgaggtcatggccgtggtcaaggccgacgcctacgggcacggcctcgtg
ccggtggcgcgcgcggcccggcaggccggtgccacgtggctcggcgtcgcccagctcgcc
gaggccctgcggctgcgggaagccgggctggaggggcggatcctcgcctggctctggacc
cccggaagcgacctgctcgccgactgcctcgccgccgacatcgacctgtccgtgccggac
gtgcgcgcgctcgcggaggtcgccggccacgtccgggcgcgcacggccgccggcggctcc
gaccgtccggcccggatccacctcgaggtggacaccggcatggggcgcaccggcctcgtg
ctcgaggagttcggcagcctcatcgaggccgcccgcgccgccgaggacgcgggcgaggtg
cgcatcgtcggagtgtggacccacctcgcgcgcgccgacgagaccggcgacgcggacgcc
gtgcgcttcacagaccggcagtacgaacggttcgcgtccgcatgcgccgcgctcgcggcg
gccggagcccagctcgaggtgaggcatatcgcgaactcggcgggcgtcgtcaccacgcgt
gagccctacgacctcgtgcgcgccggcctcatcacctacgggatctcgccgctgacgcac
gagaccccggccgacctcgggctgcggcccgcgctccggctcaccgcgccgctggccatg
gtcaagcacctgccggccgggcacggcgtctcctacgggggcacgtacgtcacggccgcc
gacacccggatcggggtcgtgccgctcggctacggggacggcatcccgcggcacggttcg
aacgtcgcgcccgtgctcgtcgcgggggagcggcgcaccatcgccgggcgcgtgtgcatg
gaccagttcatggtcgacctgggcggctcgggacacgtggatgcggcggccggcaccgag
gccgtgctcctcggcgacgcgctccgcggggagccgaccccgcgcgagtgggccgacgcg
atcggtacgatcgactacgagatcgtgaccaggctcggcgcgcgcatcccacggatctac
accggcgacgacgaagggaccaccccgcccatgctcaccatccccctccccgacgccgcg
gccacgaccgcgctgggcatccggcttgcaccccacctgcgcgcgggcgacctcgtggtg
ctcaccggcggactaggtgcgggcaagaccaccctgacccagggcctcggcgccgccctc
gaggtcgagggccaggtcgcctccccgaccttcatcatcgcccgggagcaccccggcccg
cgggtcggcctcgtgcacgtggacgcctaccggctcacgtcgctcgcggaggtcgaccag
ctcgacctcgacgcctccctcgaggattcggtcaccgtggtcgaatggggcgagggcctc
gtggaggacctggccgagagccgcctcgagatcgcgctcacccggccccggggggacgcc
gccgacctcgtgcgcaccgcccggatcgaggcgttcggcccccgctgggccggcgaggac
tggtccgacctggcgacgtcccggccggacgtagactga
DBGET
integrated database retrieval system
