Pseudomonas sediminis: HNQ25_15725
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Entry
HNQ25_15725 CDS
T07154
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psej03009
]
HNQ25_15725 (rimO)
Enzymes [BR:
psej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HNQ25_15725 (rimO)
Ribosome biogenesis [BR:
psej03009
]
Prokaryotic type
ribosomal protein modification factors
HNQ25_15725 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QNG99742
UniProt:
A0A7G7RAE1
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All DBs
Position
3360951..3362273
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDMKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEVVPDDVKQERW
ERFMAHQQAISSARLQAKIGLEMDVLVDEVDSEGAVARSWADAPEIDGSVFIDSPNVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccaccccgaaagtcggcttcgtctccctcggatgcccgaaagcgactgtc
gactccgaacgcatcctgacccaactgcgcatggaaggttacgagatcgtgccgacctac
caggatgccgacgtggtggtggtcaacacctgtggcttcatcgacagcgccaaggccgag
tctcttgatgccatcggcgaggccctggccgagaacggcaaggtgatcgtcaccggttgt
atgggcgtggccgaagacagcattcgcgacgtacacccgagcgtgctggccgtcaccggc
ccgcagcagtacgagcaagtggtcaacgcggtgcacgaggtcattccgccgaagaccgag
cacaacccgctgatcgacctggtaccgccgcagggcatcaagctgaccccgcgtcactac
gcctacctgaagatttccgaaggctgcaaccatacctgcagcttctgcatcatcccatcc
atgcgcggcaagctggtcagccgtccggtgggcgacgtgctcagcgaagccgagcgcctg
gtcaaggctggcgtgaaagagctactggtgatcagtcaggacaccagcgcctacggcgtc
gatatgaagtacaagctggacttctggaacggccagccggtgaaaacgcgcatgctcgag
ctgtgcgaagcgctgtcgtcgatgggcgtgtgggtgcgtctgcactacgtctacccctac
cccaacgtcgatgacgtgatcccgctgatggccgccggcaagctgctgccgtatctggac
atccccttccagcacgccagcccgaaagtgctcaagtcgatgaagcgccctgcgttcgaa
gacaagaccctggcgcgcatcaagaagtggcgtgagatctgcccggagctgaccatccgc
tccaccttcatcgtcggcttccctggcgagaccgaggaagacttccagtacctgctggac
tggctgaccgaagcccagctcgaccgcgtcggctgcttccagtattccccggtcgaaggc
gctcccgccaacgacctgggcctggaagtagtacctgacgacgtcaagcaggagcgctgg
gagcgcttcatggcgcaccagcaggcaatcagcagcgcacgcctgcaggccaagatcggc
ctggagatggacgtgctggtcgacgaagtggacagcgaaggcgccgtggctcgctcctgg
gccgacgctccggagatcgatggcagcgtgttcatcgactcccccaacgtcaagccgggc
gacaaggtgcgtgtgcgcatcgtcgatgccgacgagtacgacatgtggggcgagttggtc
tga
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