Pseudodesulfovibrio cashew: GM415_11410
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Entry
GM415_11410 CDS
T06353
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psel03016
]
GM415_11410
Enzymes [BR:
psel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
GM415_11410
Transfer RNA biogenesis [BR:
psel03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GM415_11410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QGY40705
UniProt:
A0A6I6JD15
LinkDB
All DBs
Position
2548326..2549636
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AA seq
436 aa
AA seq
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MIRFFTATLGCKINQYETRAIAEAWAGDTGLALEAASAAEADLILVNSCAVTANAVADLR
QTVRRFHRDNPGAEIVITGCAAQVMPEELEKLPGVVRVVPQEDKSMLLAGPSPDAAPAPS
PEAKSVFAPFAISGYDRARAVVKVQDGCSHHCTYCIVPLTRGRSVSRPMEEVVAEVGRLL
DNGFRELILSGINLRHYGRGLDGKADFWDLVARLEAEFGSEWAGRARFRISSVEPGQLGD
KAFGVLAGSKMVCPQLHLSLQSGDPDVLKAMGRGHYSPETAVEFLDRLREAWPVFGLGAD
LIAGFPGESEEQFANTLELCRRLPLTYAHVFPYSERPGTRAVELPGSVEVPVRKERAARL
RKLIAGKKRAFLDRLLALEHLDVLVQDAEGRGVSEFYAACRFLSLPEGANPRSLVRARPV
RKEKGVILVEPLEVLS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgattcgattctttaccgccaccctgggatgcaagatcaaccagtatgaaacccgcgcc
attgcggaggcctgggccggtgacacggggttggccctggaggcggcctcggctgcggag
gcagacctgatcctggtcaactcctgcgccgtgaccgctaatgccgtggccgacctgcgc
cagaccgtgcgccgtttccatcgggacaaccccggcgcggagatcgtcatcaccgggtgt
gcggctcaggtcatgcccgaggagctcgaaaagctgcccggtgtggtccgggttgttccc
caggaagacaaatccatgcttctggccggaccgtcgccggatgccgctcccgcaccatct
ccggaagcgaaatcggtcttcgcaccgttcgccatctccggctatgaccgggctcgggcc
gtggtcaaggttcaggacggttgttcccatcattgcacctactgcatcgtgccgctgacg
cgcggcaggtccgtctcccggcccatggaagaggtagtggccgaagtaggtcgcctgctg
gacaacggttttcgcgagttgatcctgagcggcatcaacctgcgtcattacggccgtggg
ctggacggcaaggccgatttctgggatctggtggcgcggcttgaggcggagtttggatcg
gagtgggcggggcgggcacgcttccgcatctcctcggtggagcccgggcagctcggcgat
aaggcttttggcgtgctggccggatcgaagatggtatgcccgcaactgcatctgtccctg
caaagcggcgatccggacgtgctcaaggccatggggcgcggacattattcaccagagaca
gccgttgaatttctggaccggcttcgcgaggcctggcctgtctttggactgggcgctgac
ctcattgccggcttccccggcgagagcgaggagcagtttgcaaacaccttggaattgtgc
cgccgcctgcccctgacctacgcccatgtttttccctattccgagcgtcccggcacccgt
gccgtggaattgccgggaagcgtggaggtgccggtgcgcaaggagcgagccgcccggctc
aggaagctgatcgccgggaagaagcgggcgtttctggacaggctgctcgccctggagcat
ctggacgtgctggtgcaggacgccgagggtcggggcgtgagcgaattttacgcggcctgc
cgcttcctttccctgcccgaaggagcgaacccgcgcagcctggttcgggccaggccagtg
cgtaaggaaaagggcgtgattctggtcgagcctttggaggtgctctcgtga
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