Pseudomonas sp. MRSN12121: TO66_00400
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Entry
TO66_00400 CDS
T03702
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem03030
DNA replication
psem03410
Base excision repair
psem03420
Nucleotide excision repair
psem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TO66_00400
03410 Base excision repair
TO66_00400
03420 Nucleotide excision repair
TO66_00400
03440 Homologous recombination
TO66_00400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psem03032
]
TO66_00400
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_00400
Enzymes [BR:
psem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TO66_00400
DNA replication proteins [BR:
psem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TO66_00400
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TO66_00400
NER (nucleotide excision repair)
GGR (global genome repair) factors
TO66_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AJO75820
UniProt:
A0A0C5E0S7
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All DBs
Position
78142..80955
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AA seq
937 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYDQLDIVPSLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDRDKLIELYSLMEFKSWLDELQRDAKRLELSE
AATPGAAVDLLTVVEVEVEVAVPAVVETRYETILDQTRFDVWLEKLKNAKLFAFDTETTG
IDAQQAQLVGLSFAVEAHEAAYIPLTHSYIGAPEQLDRDTVLRALKPLLEDPQKLKVGQH
AKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAEKYLGHATVS
FQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQVLHEKLAAIPSLASVLSDIEMP
VVPVLARIERQGALVDADLLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYD
KLGLPVLKKTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQINPR
TGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIEL
RIMAHLSRDEGLMNAFRNNLDVHTATAAEVFKVDLENVSSDQRRSAKAINFGLIYGMGAQ
KLGKDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETLFGRRLYLPEINSN
KPQERAGAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVRED
LVAQVSEEIRGYMSNAATLDVPLLVEVGVGSNWDEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtatcgcgccttccac
gcgctgccgcccttgaccacttccaaaggcatgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtaccccgacagcccgttcgccgtggtgttcgac
gccaagggcgggactttccgcgacgagatgtatgccgagtacaaggccaatcgcccgagc
atgcccgatgacatgcgcgtccagatcgagccgctgcacgccagcgtgatcgccctgggc
tttccgctgctgtgcgtcgagggcgtcgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcggcggctgaccgtccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtggacggccacattacgctggtcaacaccatgtccggaagcagcatggacgtggaa
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcgctgatg
ggcgattcctccgacaacattccgggggtgccggggattggccccaagaccgcttctggc
ctgctggtcggggtgaacggcggcctgaaagagctgtatgaccagctcgacatcgtgccg
agcctgccgattcgcggggccaagaccctgccggccaagctcgaggaacacaaggaaatg
gcgttcctctcctatcagctggcgaccatcaaggtcgacgtaccgctggacatcggcctg
gatgacctgcacctgggcgagccggaccgggacaagctgatcgagctgtacagcctgatg
gagttcaagagctggctcgacgaactgcagcgcgacgccaagcgcctcgaactgagcgaa
gccgcgacgcctggagcggcggtcgatctgctgaccgtggtcgaggttgaagtcgaggtc
gcggtgccggccgttgtcgaaacccgatatgaaaccatcctcgaccagacgcgtttcgac
gtctggctggagaagctgaagaacgccaagctgttcgccttcgacaccgaaaccaccggc
atcgatgcccagcaggcgcagcttgtgggcttgtctttcgcggtagaggcccacgaagcg
gcctatatcccgctgacccactcctacatcggcgcgcccgaacagctggatcgcgatacg
gtcctgcgcgcgttgaagccgctgctggaggacccgcaaaaactaaaggtcggccagcac
gccaagttcgacatgaacatcctggccaactgcgccatcggtggcgatcaggccaatggc
atcaccgtgcgtggtgtcgctttcgacacgatgctcgaatcctacgtgctcaactccacg
gccacccgccacgacatggacagcctggcggagaaatacctgggccatgccaccgtgagt
ttccaggacatcgccggcaagggcgccaagcagctgacgttcgatcagattgcccttgag
caggccgggccctatgccgccgaagacgccgatgtgaccctgcgcctgcatcaggtgctg
cacgagaagctggcggcgatcccgagcctggccagtgtgctcagcgatatcgaaatgccc
gtggtgccggtgctggcgcgcatcgagcgccagggtgcgctggtggatgccgacctgctg
ggcgtgcagagcatcgagctgggcgacaagatggtggcgctggagcgcgaagccttcgag
attgccggcgaggaattcaacctggggtcgcccaagcaactgggggtgatcctctacgac
aagctcggcctgccggtgctgaagaagaccgccaagggccagccgtccaccgccgaagag
gtgctggccaagctggccgaggacgactacccgctgcccagggtgctgatgcaataccgc
tccatgagcaagctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgt
accgggcggatccacacctcctaccatcaggcggtggcctccaccgggcgtttgtcctcc
agcgatccgaacctgcagaacatcccggtgcgtaccgccgaaggccggcgcatccgccag
gcgttcatcgctccgccgggctacaagctgctggcggcggactattcgcagattgagttg
cggatcatggcgcacctgtcccgcgacgaaggcttgatgaatgctttccgtaacaacctc
gacgtgcacacggcgacggccgccgaggtgttcaaggtcgacctcgagaacgtcagctcc
gatcagcgccgcagcgcgaaggcgatcaacttcgggctgatctacggcatgggcgcgcag
aagctcggcaaggacatcggcgtcgataccaagaccgccaaggcctatatcgacacctac
ttcgcccgttaccccggcgtgcgcgaatacatggaccgcacgcgtgcccaggccgcggac
cagggctatgtggaaaccctgttcgggcgtcgcctgtacctgccggagatcaactccaac
aagccacaggagcgtgccggcgccgagcgtacggcgatcaacgcgccgatgcagggtacg
gcggccgacatcatcaagaaggcaatggtggcggtggacaattggctggcgacctcgggc
ctggatgccaaagtcatcctgcaagtgcacgacgaactggtgctggaggtgcgcgaagat
ctggtggcccaggtgagcgaggagatccgcggctatatgagcaacgccgcgaccctggat
gtgccgctgctggtcgaagtcggggtgggcagcaactgggacgaggcgcactga
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