KEGG   Pseudomonas sp. MRSN12121: TO66_00400
Entry
TO66_00400        CDS       T03702                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psem  Pseudomonas sp. MRSN12121
Pathway
psem03030  DNA replication
psem03410  Base excision repair
psem03420  Nucleotide excision repair
psem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TO66_00400
   03410 Base excision repair
    TO66_00400
   03420 Nucleotide excision repair
    TO66_00400
   03440 Homologous recombination
    TO66_00400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psem03032]
    TO66_00400
   03400 DNA repair and recombination proteins [BR:psem03400]
    TO66_00400
Enzymes [BR:psem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TO66_00400
DNA replication proteins [BR:psem03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TO66_00400
DNA repair and recombination proteins [BR:psem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TO66_00400
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TO66_00400
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AJO75820
UniProt: A0A0C5E0S7
LinkDB
Position
78142..80955
AA seq 937 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYDQLDIVPSLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDRDKLIELYSLMEFKSWLDELQRDAKRLELSE
AATPGAAVDLLTVVEVEVEVAVPAVVETRYETILDQTRFDVWLEKLKNAKLFAFDTETTG
IDAQQAQLVGLSFAVEAHEAAYIPLTHSYIGAPEQLDRDTVLRALKPLLEDPQKLKVGQH
AKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAEKYLGHATVS
FQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQVLHEKLAAIPSLASVLSDIEMP
VVPVLARIERQGALVDADLLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYD
KLGLPVLKKTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQINPR
TGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIEL
RIMAHLSRDEGLMNAFRNNLDVHTATAAEVFKVDLENVSSDQRRSAKAINFGLIYGMGAQ
KLGKDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETLFGRRLYLPEINSN
KPQERAGAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVRED
LVAQVSEEIRGYMSNAATLDVPLLVEVGVGSNWDEAH
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtatcgcgccttccac
gcgctgccgcccttgaccacttccaaaggcatgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtaccccgacagcccgttcgccgtggtgttcgac
gccaagggcgggactttccgcgacgagatgtatgccgagtacaaggccaatcgcccgagc
atgcccgatgacatgcgcgtccagatcgagccgctgcacgccagcgtgatcgccctgggc
tttccgctgctgtgcgtcgagggcgtcgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcggcggctgaccgtccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtggacggccacattacgctggtcaacaccatgtccggaagcagcatggacgtggaa
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcgctgatg
ggcgattcctccgacaacattccgggggtgccggggattggccccaagaccgcttctggc
ctgctggtcggggtgaacggcggcctgaaagagctgtatgaccagctcgacatcgtgccg
agcctgccgattcgcggggccaagaccctgccggccaagctcgaggaacacaaggaaatg
gcgttcctctcctatcagctggcgaccatcaaggtcgacgtaccgctggacatcggcctg
gatgacctgcacctgggcgagccggaccgggacaagctgatcgagctgtacagcctgatg
gagttcaagagctggctcgacgaactgcagcgcgacgccaagcgcctcgaactgagcgaa
gccgcgacgcctggagcggcggtcgatctgctgaccgtggtcgaggttgaagtcgaggtc
gcggtgccggccgttgtcgaaacccgatatgaaaccatcctcgaccagacgcgtttcgac
gtctggctggagaagctgaagaacgccaagctgttcgccttcgacaccgaaaccaccggc
atcgatgcccagcaggcgcagcttgtgggcttgtctttcgcggtagaggcccacgaagcg
gcctatatcccgctgacccactcctacatcggcgcgcccgaacagctggatcgcgatacg
gtcctgcgcgcgttgaagccgctgctggaggacccgcaaaaactaaaggtcggccagcac
gccaagttcgacatgaacatcctggccaactgcgccatcggtggcgatcaggccaatggc
atcaccgtgcgtggtgtcgctttcgacacgatgctcgaatcctacgtgctcaactccacg
gccacccgccacgacatggacagcctggcggagaaatacctgggccatgccaccgtgagt
ttccaggacatcgccggcaagggcgccaagcagctgacgttcgatcagattgcccttgag
caggccgggccctatgccgccgaagacgccgatgtgaccctgcgcctgcatcaggtgctg
cacgagaagctggcggcgatcccgagcctggccagtgtgctcagcgatatcgaaatgccc
gtggtgccggtgctggcgcgcatcgagcgccagggtgcgctggtggatgccgacctgctg
ggcgtgcagagcatcgagctgggcgacaagatggtggcgctggagcgcgaagccttcgag
attgccggcgaggaattcaacctggggtcgcccaagcaactgggggtgatcctctacgac
aagctcggcctgccggtgctgaagaagaccgccaagggccagccgtccaccgccgaagag
gtgctggccaagctggccgaggacgactacccgctgcccagggtgctgatgcaataccgc
tccatgagcaagctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgt
accgggcggatccacacctcctaccatcaggcggtggcctccaccgggcgtttgtcctcc
agcgatccgaacctgcagaacatcccggtgcgtaccgccgaaggccggcgcatccgccag
gcgttcatcgctccgccgggctacaagctgctggcggcggactattcgcagattgagttg
cggatcatggcgcacctgtcccgcgacgaaggcttgatgaatgctttccgtaacaacctc
gacgtgcacacggcgacggccgccgaggtgttcaaggtcgacctcgagaacgtcagctcc
gatcagcgccgcagcgcgaaggcgatcaacttcgggctgatctacggcatgggcgcgcag
aagctcggcaaggacatcggcgtcgataccaagaccgccaaggcctatatcgacacctac
ttcgcccgttaccccggcgtgcgcgaatacatggaccgcacgcgtgcccaggccgcggac
cagggctatgtggaaaccctgttcgggcgtcgcctgtacctgccggagatcaactccaac
aagccacaggagcgtgccggcgccgagcgtacggcgatcaacgcgccgatgcagggtacg
gcggccgacatcatcaagaaggcaatggtggcggtggacaattggctggcgacctcgggc
ctggatgccaaagtcatcctgcaagtgcacgacgaactggtgctggaggtgcgcgaagat
ctggtggcccaggtgagcgaggagatccgcggctatatgagcaacgccgcgaccctggat
gtgccgctgctggtcgaagtcggggtgggcagcaactgggacgaggcgcactga

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