Pseudomonas sp. MRSN12121: TO66_09930
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Entry
TO66_09930 CDS
T03702
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem00071
Fatty acid degradation
psem00280
Valine, leucine and isoleucine degradation
psem00310
Lysine degradation
psem00362
Benzoate degradation
psem00380
Tryptophan metabolism
psem00410
beta-Alanine metabolism
psem00640
Propanoate metabolism
psem00650
Butanoate metabolism
psem00907
Pinene, camphor and geraniol degradation
psem00930
Caprolactam degradation
psem01100
Metabolic pathways
psem01110
Biosynthesis of secondary metabolites
psem01120
Microbial metabolism in diverse environments
psem01200
Carbon metabolism
psem01212
Fatty acid metabolism
Module
psem_M00087
beta-Oxidation
psem_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
TO66_09930 (fadB)
00650 Butanoate metabolism
TO66_09930 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
TO66_09930 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TO66_09930 (fadB)
00310 Lysine degradation
TO66_09930 (fadB)
00380 Tryptophan metabolism
TO66_09930 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TO66_09930 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
TO66_09930 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TO66_09930 (fadB)
00930 Caprolactam degradation
TO66_09930 (fadB)
Enzymes [BR:
psem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TO66_09930 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
TO66_09930 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
TO66_09930 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
TO66_09930 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AJO77605
UniProt:
A0A0C5E6B7
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All DBs
Position
2180532..2182679
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRSAVDAIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgttcggccgtggacgccatcaaggcagatgcgtcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagcttgttgcaggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaatgttccgaccgttgccgcgatcaatggcatcgcgctgggtggcggtctggaa
atgtgcctggcagcggactaccgcgtcatgtcgaccagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggtaccgttcgcctgccgcgcatcatcggt
gccgacaacgccatcgagtggattgccgctggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggtgccgtcgacgcggtcgtcgctccggaaaaacttcatgaagccgccctggcc
accgtcaagcgcgccatctccggcgagttcgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgaacagatgatgtccttcgaaaccgccaagggtttt
gtcgccggccaggctggcccgaactacccggcgccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggaagtggaggccgcaggcttcgtcaaa
ctggccaagacttctgccgcgcagagcctgatcggcctgttcctgaatgaccaggagttg
aagaaaaaggccaaggcctatgacgaaatcgcccacgacgtgaagcaggccgccgtactt
ggcgccggcatcatgggcggcggtatcgcctaccagtcggcgtccaagggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcaggggctggcggaagccgccaagctg
ctggtcggccgcgtcgacaaaggtcgcatgaccgcggcgaagatggccgaagtgctcaac
ggcattcgcccgacgctgtcctacggtgacttcggtcacgtcgacctggtggtcgaggcg
gtcgtcgagaacccgaaggtcaagcaagcggtactggctgaagtcgaagcccaggtcaaa
gaggacaccatcctcgcctcgaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcatatgatgccg
ctggtcgaagtcatccgtggtgagaagtccagcgagctggcggtcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccgatgggcccggcctacctg
atggacgtggtcggcatcgacactggccaccatggccgcgatgtgatggccgaaggtttc
ccggatcgcatgaaggacgaccgtcgttcggccgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggtttctacgcctacgaggccgacaagaaaggcaagcag
aagaaagtggccgacccttcggtgctggaagtgctcaagccgatcgtctacgagcagcgt
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgaaaccgcggccgaagccgacatgggcctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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