Pseudomonas sessilinigenes: C4K39_0393
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Entry
C4K39_0393 CDS
T07575
Name
(GenBank) tRNA 4-thiouridine synthase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep00730
Thiamine metabolism
psep01100
Metabolic pathways
psep01240
Biosynthesis of cofactors
psep04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C4K39_0393
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C4K39_0393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psep03016
]
C4K39_0393
Enzymes [BR:
psep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C4K39_0393
Transfer RNA biogenesis [BR:
psep03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C4K39_0393
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
AZC22098
LinkDB
All DBs
Position
429758..431212
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVDGVWDNLELETAVTEPK
VLKDMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEVLAGKIFAVRCKRAGKHE
FSSMDVEKYVGSQLRRQCGAAGIDLKAPQIEVRMEIRDQRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMGHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIAERLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIASHKQDIIDLANQIGTADFAKHMPEYCGVISVNPKTNAKRH
RVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDVQVEEVSEALAGQIVIDIRHPDAQ
EDEPLELAGIEVKALPFYAVNARFKELDPNRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccggaaatcaccatcaagagccgcccggttcggacg
cgtttcatccgtcagttggccaagaacatccgtgccgtgctccgtgacctggacccggct
gtggtggtcgatggtgtgtgggacaacctcgagctggaaaccgccgtcaccgagcccaag
gtgctcaaggacatgaccgagcgcctgagctgcatgcccggcatcgcgcatttcctgcag
gtcgacgagtaccccctgggggacttcgacgacatcgtcgccaagtgcaagcagcacttc
ggcgaagtcttggcggggaagattttcgctgtgcgctgcaagcgcgccggcaagcatgaa
ttcagttccatggacgtggaaaaatacgtcggtagccagttgcgccgacagtgcggtgcc
gcgggaatcgacctgaaagcgccgcaaatcgaagtgcggatggaaattcgcgaccaacgg
ttgttcgtgatccacagccagcacaatggcatcggcggctacccgctgggcgccctggaa
cagaccctggtgttgatgtccggtggcttcgactccaccgtggcggcctaccagatcatg
cgtcgcggcctgatggggcatttctgcttcttcaacctgggcggtcgtgcccacgaattg
ggcgtgatggaagtcgcgcactatatttggaagaagtacggcagctcccagcgcgtgctg
ttcgtcagcgtgccgttcgaggaagtgctgggcgagatcctcggcaaggtcgacaacagt
catatgggcgtcatcttgaagcgtatgatgttgcgtgccgcctcgagcatcgccgagcgc
ctgcacatcgatgcgctggtcaccggcgaggcgatttcccaggtgtccagccagaccctg
ccgaacctgtcggtgatcgactgcgtgaccgacaagctggtgctgcggccgctgatcgcc
agccacaagcaggacatcatcgacctggccaaccagattggcaccgctgactttgccaag
cacatgccggagtactgcggggtcatctcggtgaaccccaagaccaatgccaagcgccat
cgcgtcgagcatgaagagaaagaattcgacatggccgtgctcgagcgtgcgatcgagcgg
gccaaactggtgccgatcgatcgagtgatcgacgagctgggccaggatgttcaagttgaa
gaagtcagcgaagcgctggccggccagatcgtcatcgacatccgtcacccggatgcccag
gaagatgaaccgctggagctggctggcatcgaagtcaaggcgttgccgttctatgcggtg
aacgcacgcttcaaggaactggaccctaaccgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgagggacatgccaatgtgcgcgtt
tatagaccgagctaa
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