Pseudomonas sessilinigenes: C4K39_4798
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Entry
C4K39_4798 CDS
T07575
Name
(GenBank) c-di-GMP phosphodiesterase (BifA)
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K39_4798
Enzymes [BR:
psep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C4K39_4798
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
AZC26444
LinkDB
All DBs
Position
complement(5089472..5091523)
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVANDAQRILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRMASIGHPNETMLAEKSRDLQKSSSRWLTDLILGQE
RTFTTQLVGRGPYSEYYGDLSITLDTATYGQDFIVSSVIIFVSGVLRALAMGLVLYLVYH
WLLTKPLSRIIEHLTTINPDRPSEHQLPLLKGHERNELGIWINTANQLLASIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGRLQRRVAVLCVGLDDFKGVNEQFS
YQTGDQLLLALADRLRGHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAA
FALDQQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMR
RRRELEKDLREALAREQFFLVYQPQISYRDHRVVGVEALLRWQHPDHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACRQLREWHDMGFSDLRMAVNLSTVQLHHAELPRVVNNLLQIYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLEDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIISEGCHEGQGYHYS
KPLSARELGAYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaaaaacagcttgtcggtgaagttgctccgcgttgtgctgctgtcg
gcactcatagtaggcgtggtcctgagctgcgcccagatcgtcttcgatgcctataagact
cggcaggcggtagccaacgacgcccagcgcatactcgacatgtttcgcgacccatcgacc
caggcggtctacagcctggatcgggagatggggatgcaagtgatcgaaggcctgttccag
gacgatgccgtgcgcatggcctctatcggccaccccaacgaaaccatgctcgcggaaaaa
tcccgcgacctgcagaagtcctccagccgctggctgaccgacctgatcctcggccaggag
cggaccttcaccacgcaactggtgggacgcggcccctatagcgagtattacggcgacctg
agcatcaccctggacaccgccacctatggccaggacttcatcgtcagctcggtgatcatt
ttcgtctccggggtcctgcgcgccctggccatgggcctggtgctgtacctggtctatcac
tggctgctgaccaagccgctgtcgcggatcatcgagcacctgaccaccatcaaccccgat
cgccccagcgaacaccaactgcccctgctcaagggccacgaacgcaatgagctggggatc
tggatcaacaccgccaaccagttgctggcctccatcgagcgcaatacccacctgcgccat
gaagcggagaacagcctgctgcgcatggcccagtacgacttccttaccggcctgcccaac
cgccagcaactgcagcagcaactggacaagatcctggtggatgccgggcgcctgcaacgt
cgggtcgcggtactgtgcgtcggcctggatgacttcaagggcgtgaacgagcaattcagc
taccagaccggcgaccagttgttgctggccctggccgatcgcctgcgtggccatagcggc
cgcctcggagccctggcccgcctgggtggcgatcagttcgccctggtccaggccgacatc
gaacagccctacgaagccgccgagctggcgcagagcatcctcgacgacctggaggcggcg
ttcgccctggaccaacaggagattcgcctgcgtgccaccatcggcatcaccctgttcccg
gaagatggcgacagcaccgagaagctcctgcaaaaagccgagcagaccatgaccctggcc
aagagccgctcgcgcaatcgctatcagttctacatcgccagcgtcgacagcgagatgcgg
cgccgccgggagctggagaaagacctgcgcgaagccctggcccgggaacagttcttcctg
gtgtaccagccgcagatcagctatcgcgaccatcgagtggtgggggtcgaggcactgctg
cgctggcagcatccggaccacggcctggtgccaccggacctgttcatcccgctggccgag
cagaacggcaccatcatcgctatcggcgaatgggtactggaccaggcctgccgccaactg
cgggaatggcacgacatgggcttcagtgacctgcgcatggcggtcaacctgtccaccgtg
cagttgcaccacgccgaactgccacgggtggtcaacaacctgctacagatctatcgcctg
ccgccacgtagcctggagctggaggtgaccgaaaccggcctgatggaagacatcagcacc
gccgcccagcatctgctgagcctgcgtcgctccggagcgctgatcgccatcgacgacttc
ggcaccggctattcgtccctcagctacctcaagagcctgcccctggacaagatcaagatc
gacaagagcttcgtccaggacctgctggaggacgatgacgatgcgaccatcgtgcgcgcg
atcatccagctgggtaagagcctgggcatgcaggtgatcgccgaaggcgtggagacagcc
gagcaggaggcctacatcatcagcgagggctgccacgaaggtcagggctatcactacagc
aaaccactctcggcacgggagctcggggcctacctcaagcaggcccagcgcagcaacgca
gcgatcctctga
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