Pseudonocardia sp. EC080610-09: AD006_19970
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Entry
AD006_19970 CDS
T04146
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq00260
Glycine, serine and threonine metabolism
pseq00630
Glyoxylate and dicarboxylate metabolism
pseq00785
Lipoic acid metabolism
pseq01100
Metabolic pathways
pseq01110
Biosynthesis of secondary metabolites
pseq01200
Carbon metabolism
Module
pseq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AD006_19970
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AD006_19970
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AD006_19970
Enzymes [BR:
pseq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AD006_19970
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF6543
Trypan_glycop
Motif
Other DBs
NCBI-ProteinID:
ALL77019
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All DBs
Position
complement(4319084..4321960)
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AA seq
958 aa
AA seq
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MSPTPQQDRPTLAELEHGLPFAERHIGPRPDELARMLEALGVDSLDALAGRALPDAIRDP
EPVGASLPAPENEAGMLAELRELADRNTVTVPMIGLGYHGTRTPSVIRRNVLENPAWYTA
YTPYQPEISQGRLEALLAFQTMVSDLTGLPVAGASLLDEATAAAEAMTLLRRAGRSKSPR
FVVDADTLPQTLDVLRTRAEPLGIELVVTDLTGGLPDGEFFGALLSYPGASGRVADPSAL
VAEAHERGALVAVASDLLSLTLLTPPGEFGADAAVGSTQRFGVPLGFGGPHAAYLSVGQK
HARQLPGRLVGVSRDADGNYALRLALQTREQHIRREKATSNICTAQVLLAVMAACYGVYH
GPEGLRSIATRTHRMAAVLAGGLREGGVEIVHDAFFDTVLARVPGRATAVVGAAHDAGIA
LRQVSDDEVGVSTSEITTVAHLQAVWEAFGVTVGDVAALDAATADAVPGGLVRTSEYLTH
RTFHEFRSETALMRWLRRLADADLALDRAMIPLGSCTMKLNAAAEMEAVTWPQFSDLHPF
APEADTAGSREMIAQLEGWLADLTGYTAVSLQPNAGSQGELAGLLAIAAYHRSRGDDERD
VCLIPASAHGTNAASAIMAGMRVVVVGTDAQGDVDLADLRSKIAEHGDRLAALMITYPST
HGVYEAQVRDVCGAVHEAGGQVYVDGANLNALVGVARPGAFGGDVSHLNLHKTFCIPHGG
GGPGVGPVAVAEHLVPFLPGRGEVGPVSAARYGSPGVLPISWAYLRMMGLDGLRRATLTA
VAAANYVAKRLAEHYPVLYSGTDGAVAHECILDLRTITKDTGVTVDDVAKRLIDHGIHAP
TMSFPVAGTLMVEPTESEDLPEIERFVQAMISIKGEIDRVAAGEWPADDNPLRNAPHTAA
CLADDKWDHPYPRELAAYPAGQTPGVHDRKVWPPVRRIDGAHGDRNLVCSCPPPEAFA
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgaccccgcagcaggaccgcccgaccctcgccgagctcgagcacgggttgccg
ttcgccgagcgccacatcggcccgcgccccgacgagctggcgcggatgctcgaggcactc
ggcgtcgactccctcgacgctctcgccggccgggccctgcccgacgcgatccgtgacccc
gagccggtcggcgcctcgctgccggccccggagaacgaggccgggatgctcgccgagctg
cgggagctggccgaccggaacacggtcaccgtcccgatgatcgggctcggctaccacggg
acccgcacaccgtcggtgatccgccggaacgtgctggagaaccccgcctggtacaccgcc
tacacgccgtaccagccggagatcagccagggccggctggaggcgctgctggcgttccag
acgatggtgtccgacctgaccggcctgccggtcgccggggcgtcgctgctcgacgaggcg
accgcggcggccgaggcgatgaccctgctgcggcgcgccgggcgctcgaagagcccgcgg
ttcgtcgtcgatgccgacaccctcccgcagaccctcgacgtgctccgcacccgtgccgag
ccgctgggcatcgagctcgtcgtcaccgacctgaccggcggccttcccgacggtgagttc
ttcggtgcgctgctgtcgtaccccggggcgtccgggcgggtcgcggacccgtccgcgctg
gtcgccgaggcgcacgagcggggcgcgctggtcgccgtcgcgtcggacctgctctcgctg
acgctgctgaccccgcccggcgagttcggggcggacgccgcggtcggctccacccagcgc
ttcggtgtcccgctcgggttcggcggaccgcacgccgcgtacctgtcggtcgggcagaag
cacgcgcgccagctgccggggcgcctggtgggcgtgtcccgcgacgccgacggcaactac
gcgctgcgcctcgcgctgcagacccgcgagcagcacatccgccgtgagaaggcgacgtcg
aacatctgcaccgcgcaggtcctgctggcggtgatggcggcctgctacggcgtctaccac
ggccccgaggggctccgctcgatcgcgacccgcacgcaccggatggccgcggtgctggcc
ggcgggctgcgcgagggtggcgtggagatcgtgcacgacgccttcttcgacacggtgctg
gcccgggtgcccgggcgggcgacggccgtcgtcggcgccgcgcacgacgccggcatcgcg
ctccggcaggtctccgacgacgaggtgggtgtgtccacctcggagatcaccaccgtcgcc
cacctgcaggcggtgtgggaggcgttcggggtgaccgtcggcgacgtcgcggccctcgat
gcggccaccgccgacgccgtgcccggtgggctggtgcggaccagcgagtacctgacgcac
cggacgttccacgagttccggtcggagaccgcgctgatgcggtggctgcgccgcctcgcc
gacgccgacctggcgctcgaccgcgccatgatcccgctcggctcgtgcacgatgaagctc
aacgccgccgccgagatggaggcggtgacctggccgcagttctcggacctgcacccgttc
gcgccggaggccgacaccgccgggtcccgcgagatgatcgcgcagctcgagggctggctg
gccgacctgaccgggtacaccgccgtctccctgcagccgaacgcgggcagccagggcgag
ctcgccgggctcctcgcgatcgccgcctaccaccgctcgcggggggacgacgagcgcgac
gtctgcctgatcccggcgtccgcgcacggtacgaacgccgcctcggcgatcatggccggg
atgcgggtggtcgtcgtcgggaccgacgcgcagggcgacgtcgacctcgccgacctgcgg
tcgaagatcgccgagcacggcgaccggctggccgcactgatgatcacctacccgtcgacg
cacggggtctacgaggcgcaggtccgcgacgtctgcggcgccgtgcacgaggcaggcggc
caggtctacgtcgacggcgcgaacctcaacgcgctggtcggggtggcccggccgggcgcc
ttcggcggcgacgtcagccacctgaacctgcacaagacgttctgcatcccgcacggcggc
ggcggtccgggtgtcgggccggtcgcggtggccgagcacctggtcccgttcctgccgggt
cgcggcgaggtcgggccggtctccgcggcgcgctacggcagcccgggcgtcctgccgatc
tcctgggcctacctgcggatgatgggtctcgacgggctgcgccgggccacgttgaccgcc
gtcgcggccgcgaactacgtcgcgaagcggctggcggagcactacccggtgctgtactcg
gggaccgacggcgcggtcgcccacgagtgcatcctcgacctgcggacgatcaccaaggac
accggcgtgacggtcgacgacgtcgccaagcgcctgatcgaccacggcatccacgccccg
accatgtccttcccggtcgccgggaccctgatggtcgagcccaccgagtccgaggacctg
ccggagatcgagcggttcgtgcaggcgatgatctcgatcaagggcgagatcgaccgggtc
gcggccggggagtggcccgccgacgacaacccgctgcgcaacgccccgcacaccgcggcc
tgcctcgccgacgacaagtgggaccacccctacccgcgggagctcgccgcgtacccggcc
ggccagaccccgggcgtgcacgaccgcaaggtgtggccgccggtccgccggatcgacggc
gcgcacggcgaccgcaacctggtctgctcctgcccgccgccggaggcgttcgcctga
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