Pseudonocardia sp. EC080610-09: AD006_25690
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Entry
AD006_25690 CDS
T04146
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pseq03009
]
AD006_25690
Enzymes [BR:
pseq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AD006_25690
Ribosome biogenesis [BR:
pseq03009
]
Prokaryotic type
ribosomal protein modification factors
AD006_25690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ALL77856
LinkDB
All DBs
Position
complement(5582006..5583511)
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AA seq
501 aa
AA seq
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MASPENAPRRAALLTLGCARNEVDSEELAGRLTGSGWELVDAEGGSPDVILVNTCGFVEQ
AKKDSIDTVLAASDVARPAGAKVVAVGCLAERYGAELAADLPEADAVLGFDAYPELAERL
GDVLGGHAPAPHVPVDRRTLLPISPVERPAATADVSVPGHDWVPDLAGIARTRLAGGPVA
SLKLASGCDRRCAFCAIPSFRGSFVSRPPADVLGEAAWLASQGVRELVLVSENSTSYGKD
LPGGTRALVDLLPRLGSTPGVERVRVSYLQPAELRPDLLAAIATTPGIAPYFDLSFQHAS
ATVLRRMRRFGSRTDFLDLCTRIRELAPEAGIRSNVIVGFPGETEEDLAELEAFLTGARL
DAVGVFGYSDEDGTEAEGYDGKVDPAEVQARVARISALADELMEQRAEERIGTEVVVLVE
RTDADDEDDCAGRAAHQGPDADGESYVVAAADDGPDPSSLRPGDLVRCRVLDTEGVDLLV
EACELLPRAGIDDPVPAVAAG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcccccgagaacgcgccccggcgcgccgccctgctgaccctgggctgcgcgcgg
aacgaggtcgactccgaggagctcgccggccgcctgaccggctccggctgggagctggtc
gacgccgagggcggctcgcccgacgtcatcctcgtcaacacctgcggcttcgtcgagcag
gccaagaaggactcgatcgacaccgtgctggccgcctcggacgtggcccgcccggccggt
gcgaaggtcgtcgcggtcggctgtttggccgagcggtacggcgccgagctggccgccgac
ctgccggaggccgacgccgtgctcggcttcgacgcctacccggagctcgccgagcggctc
ggcgacgtcctcggcggccacgcccccgccccgcacgtgccggtggaccgccgcaccctg
ctgccgatctcgccggtggagcggcccgccgccaccgccgacgtgtcggtgccggggcac
gactgggttcccgacctcgcgggcatcgcccgcacccggctcgccggcggaccggtcgcg
tcgctgaagctcgcctcgggctgcgaccgccggtgcgcgttctgcgcgatcccgtccttc
cgcggcagcttcgtgtcccgcccgcctgccgacgtcctcggcgaggcggcctggctggcg
tcgcagggtgtgcgggagctggtactggtcagcgagaactcgacgtcgtacggcaaggac
ctgccgggcggcacccgcgcgctggtcgacctgctgccgcgcctcggctccacccccggt
gtcgagcgggtgcgcgtgtcgtacctgcagcccgccgagctgcgcccggacctgctcgcc
gcgatcgcgacgacgccggggatcgcgccctacttcgacctgtcgttccagcacgcgtcg
gcgaccgtgctgcgccggatgcgccgcttcggctcgcgcaccgacttcctggacctgtgc
acgcggatccgcgagctcgcgccggaggccgggatccggtccaacgtgatcgtcgggttc
cccggcgagactgaggaggacctcgccgagctcgaggcgttcctgaccggggcccggctc
gacgccgtcggcgtgttcgggtactccgacgaggacggcaccgaggccgagggttacgac
ggcaaggtcgacccggccgaggtgcaggcccgcgtcgcgcggatctcggcgctggccgac
gagctcatggagcagcgggccgaggagcggatcggcaccgaggtcgtcgtcctggtcgag
cggaccgatgccgacgacgaggacgactgcgccggccgcgccgcccaccagggcccggac
gccgacggcgagtcctacgtcgtcgccgcggccgacgacggcccggacccgtcgtcgctg
cgcccgggtgacctcgtccgctgccgggtgctcgacaccgagggtgtcgacctgctcgtg
gaggcctgcgagctgctgccgcgcgccgggatcgacgaccccgtgcccgcggtggcggcc
ggatga
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