Polypterus senegalus (gray bichir): 120516194
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Entry
120516194 CDS
T08668
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00052
Galactose metabolism
psex00511
Other glycan degradation
psex00531
Glycosaminoglycan degradation
psex00600
Sphingolipid metabolism
psex00604
Glycosphingolipid biosynthesis - ganglio series
psex01100
Metabolic pathways
psex04142
Lysosome
Module
psex_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120516194 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
120516194 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120516194 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
120516194 (glb1)
00511 Other glycan degradation
120516194 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120516194 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120516194 (glb1)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
120516194 (glb1)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120516194 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
120516194
NCBI-ProteinID:
XP_039593640
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All DBs
Position
15:complement(10633599..10753216)
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AA seq
650 aa
AA seq
DB search
MASRVLLLFLFLVSALSCFVVVSSRSFEIDYKNDCFLKDGRPFRYISGSIHYNRIPSYYW
KDRLLKMFMAGLNAIQIYVPWNFHETVQNQYNFKGDRDLEHFLQLANDIGLLVILRPGPY
ICAEWEMGGLPAWLLKKKDILLRTMDADYIAAVDRWMGELLPRIKPFLYQNGGPIITVQV
ENEYGSYFACDFNYLRHLMKLFRSHLGEEVVLFTTDGAGLGYLKCGTLQGLYATVDFGPG
GNVTSQFMVQRHAEPNGPLVNSEFYTGWLDHWGEAHSVVSKDVVAKSLNEILLHGANVNL
YMFIGGTNFGYWNGANSPFASQPTSYDYDSPLTEAGDLTEKYFAIREVIKMFKDVPQGPV
PPSTPKFSYGAVQMKKFQTVSSALDLISFSGPVQSIFPLTFIDLDQNFGFILYRTLLPKD
YINPTPLSSPLNGIHDRAYITLDGVPAGILERDKILSINITGKAGGQLDILVENMGRINY
GKYINDFKGLVSNLTLGADILTGWHIYTLNIDEVIGRGLLNKAEELNHRSVAPANLTSPA
FYRGSFEIPSGIPDLPQDTYIQFPEWRKGQVWINGFNLGRYWPARGPQITLYVPAHILST
SAPNNITVLELERSPCEYGPCVVEFVSTPILNATVPHSTKHKHLYVKDFV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgtgtgctgttgctgttcctgttcctggtctcggcgttgagctgcttcgtt
gttgtttcatctcgatcatttgagattgattataaaaacgactgttttctgaaggatggc
agacctttccgctacatctcaggcagcatacattataatcgcatccccagttactattgg
aaagaccgattactgaaaatgttcatggcaggattaaacgccatacagatttatgtacct
tggaacttccatgagactgtacaaaaccagtacaacttcaaaggggacagggatttagag
cactttctgcagctggccaatgatatcggactactggtaattttaagaccaggtccatat
atttgtgctgagtgggaaatgggtggtttacctgcctggttacttaaaaaaaaggatatt
ttgcttcgcactatggatgctgattacattgcagctgttgaccgttggatgggtgaactt
cttccaaggatcaagccttttctgtatcaaaatggtggccctattattacagttcaggta
gaaaatgagtatggtagctacttcgcttgtgatttcaattatcttcggcatctcatgaag
cttttccgttctcatttgggagaagaggtggtgttgttcactactgacggggcgggtctg
ggttatctgaagtgtggaactctgcagggcctttatgccacagtggattttgggccaggt
ggcaatgttacctcacagttcatggtacaaaggcatgctgagcctaatggaccgttggtg
aattccgaattctacacaggctggttagaccattggggtgaagcccactcagttgtcagc
aaagacgtcgtcgccaaatctctgaatgaaatcctgctgcatggagccaatgttaacttg
tatatgtttataggaggaacaaacttcggttattggaatggtgcaaattcaccatttgct
tcccaacccacaagctatgattatgattctcctcttactgaagcaggggatctgactgaa
aaatattttgccatacgtgaggttattaaaatgttcaaagatgtccctcagggtccagta
cctccatcaacacccaagttttcctatggagctgttcaaatgaagaagtttcagacagtc
tcctcagcacttgatctcatatctttctctgggccagtccaaagcatctttcctttgact
ttcattgacttggatcagaattttggcttcatactgtatcggactctactgcccaaagac
tacattaaccctactcctctgtcatcaccattaaatggtattcatgaccgggcttacata
acgttggatggggtgcctgctggaattcttgagcgtgataaaattttatccattaacata
actgggaaagctggtggtcagctggacattcttgtagagaacatgggcagaattaactat
ggaaaatatatcaatgacttcaagggtcttgtgtccaatttaaccctgggagcagacata
ttgactggctggcacatctatactttgaacattgatgaagtcattggcagaggtttgcta
aataaagcagaagagctgaaccacaggtcggtggcacctgcaaatctcaccagccctgct
ttctataggggtagttttgaaattcccagtggaatacctgatcttccacaggatacttac
atccagtttcctgagtggcggaagggacaagtctggattaacggctttaatcttggccga
tactggcccgcccggggacctcagattactttatatgtgccggctcatattctgagcact
tctgcacccaacaacattactgtgctggagctggaaaggtcaccatgtgaatacggacct
tgtgtcgtggagtttgtgtcaacaccaatcctgaatgcaaccgtccctcactccactaaa
cacaaacacctttacgttaaagactttgtataa
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