Polypterus senegalus (gray bichir): 120516931
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Entry
120516931 CDS
T08668
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120516931 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120516931 (polr1b)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120516931 (polr1b)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120516931 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
120516931
NCBI-ProteinID:
XP_039594886
LinkDB
All DBs
Position
16:23305344..23342417
Genome browser
AA seq
1135 aa
AA seq
DB search
MDSASKWKNLPAAPCLKHLTDSGFGSVPAEQHAAVQELTRAHIESFDHAATNGLCRAVQA
IPPLEMMYKNDRLTFTFVDAAVHSPGVPKGSICKETKVFPAECRGRKSTYRGKIMADISW
SVNGIPKGIIKQSLGYVPIMVKSKLCNLHRLSPEGLIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIALARPKWKSRGQGYTQYGVSMRCVRDEHTAINMNLHYLDNGTVNVNFIY
NKELFFIPLGFALKALVDFTDYQIYQELIKGREDNSFFRNCVTEMLRMVMEEGCITKKQV
LNYLGERFRVKMNLPDWSTNEECAEILLDRCVCIHLKFNSEKFYLLCLMTRKLFTFAKEE
CMEENPDSLMCQEVLTPGQLYLMFLKERMEAWLVSVKIAMEKKVQKTDVPLTSEGLMKVF
NMGMEVTRAFEYLLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCIHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHMSATCEIVSECLVSPTIAALLCSLGVT
PVDATPCQPYSESYPVVLDGNMIGWVERNFAPAVANALRKFKVLKEKKIPPATEIVLVPM
TGKASIYPGLLIFTTPCRMVRPVQNLLLGKEELIGTFEQLFIDVAITPDEIVPGVTSHQE
LFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLYTYLDRSDNKLYRLQTPQSP
LVRPYMYDYYNMDNYPIGTNAVVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTELVD
LDEKIRKGDDCMVFGVKPNDPRKTDKLDDDGLPYIGAVINYGDPYYSYLNLNTGESFIVY
YKSKESCVVDSIKVCSNESGTGKFKRVCITTRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFTFSEENSALD
YFGKMMKAAGYNFYGTERMYSGISGVELEADIFIGIVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNIQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCIECGSLLSPL
LEKPPPHWSATRHRKYICTLCKKSESVDVVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcttcgaagtggaaaaatctgccagctgccccatgtttgaaacatttaact
gattcgggatttggctcagtgcctgcggaacagcatgctgcggtacaggagctgacgaga
gctcacattgagtcgtttgatcacgcagctacaaatgggttgtgtcgagcggtgcaggct
atacctcctctggagatgatgtacaaaaacgatcggctcacatttacatttgtcgatgct
gcagtgcactcgccaggggtaccaaaaggaagtatttgtaaagaaacaaaagtgttccca
gcagagtgcagagggcgtaaaagcacttacagaggaaagataatggcagatattagctgg
tctgttaatggtattccaaagggaattattaagcagtcccttggttatgtgccaatcatg
gtgaaatcgaagctctgcaacctacatcgcctttctccagagggcctcattgaacatcat
gaagaagctgaggaaatgggaggatatttcataataaatggaatagagaaggtaataaga
atgttgattatgccccgaaggaattttcctattgcattggcaagaccaaagtggaagagc
agaggtcaaggctacactcagtatggtgtttcaatgcgttgtgtaagggatgagcacact
gctattaatatgaacctgcattatttggacaatggaactgtaaatgttaatttcatttac
aacaaagaacttttttttattccactgggttttgcactcaaggctttagttgactttaca
gattatcagatataccaagaactaatcaaaggaagagaggacaattccttctttagaaac
tgtgtgactgaaatgctgcgtatggtgatggaagaaggatgtattacgaagaaacaggtt
ctcaactatcttggtgagagatttagagtgaagatgaacttgccagactggtccaccaat
gaagagtgtgcagaaatccttttagatcggtgcgtttgtattcacttaaaatttaattct
gaaaaattctatcttctgtgcttaatgacacggaagttgttcacttttgccaaggaagaa
tgcatggaagaaaaccctgacagtttaatgtgtcaagaggtcttaactcctggacagctc
tacctgatgtttttaaaggagcgaatggaggcttggcttgtatctgtaaaaattgctatg
gagaaaaaggtgcagaaaacagatgttcctctaacctcagaaggactcatgaaagttttt
aatatggggatggaggttactagagcctttgaatatcttttagcaacgggaaaccttcga
tctaaaactggcctgggaatgctgcaggactctggtctgtgtgtagtggctgacaagctg
aactttattcgatacttatctcactttcgttgcatacatcgaggtgctgcttttgccaag
atgaggaccactacagtgcggcgactgctgccagagtcctggggttttctgtgtcctgtt
catacacctgatggagaaccttgtggtcttatgaatcatatgtctgccacatgtgaaatt
gtatctgaatgtttagtttcacctaccatagctgctctgctctgctcacttggagttacc
ccagtagatgccactccatgtcagccttactcagaaagctaccctgtggttttggatgga
aacatgataggctgggttgaaagaaatttcgctcctgctgtggcaaatgctttgagaaaa
tttaaggtacttaaggaaaagaagatcccaccagcaactgaaattgttcttgttccaatg
actggaaaagctagcatttacccaggacttctaatcttcactacaccctgcagaatggtt
cgaccagtccagaatttactactgggaaaagaagaactgattggcacttttgaacagctt
ttcattgatgttgcaataacgccagatgaaattgttcctggagttacatctcatcaagag
ctgttcccacacagcatgcttagtgttgttgccaatttcatcccattctccgaccataac
cagagtcccagaaacatgtaccagtgtcagatgggtaaacaaactatgggtttcccttta
tatacatacctagaccggtctgacaacaagttataccgtctccaaacacctcagagtcca
ctggtgagaccatacatgtatgattattacaatatggacaactaccccattgggacaaat
gcggtggtagctgttatctcttacacgggctatgatatggaggatgccatgatcgtgaat
aaagcatcctgggagaggggttttgctcatggcagtgtttataagaccgagttggtggac
cttgacgaaaagatcagaaagggcgatgactgcatggtttttggcgttaagcctaatgat
ccaagaaaaactgataaattggacgatgatggacttccttacattggagctgttataaac
tatggcgatccgtattacagctaccttaaccttaatactggagagagttttattgtatac
tacaagagcaaagagagctgtgttgtggacagcattaaagtatgcagcaacgaaagtggc
actggcaaatttaaacgtgtctgcatcaccaccagagtgccccgcaacccaaccattggt
gacaagtttgctagccgtcatgggcaaaaaggtatccttagtcgactgtggcccgcagag
gatatgccttttacagagagtggcatgatgcccgatatcctcttcaatcctcatggcttc
ccatctcgtatgacaatcggtatgcttatcgagagcatggcaggcaagtcggcagcttta
catggactgagtcatgatgccacccctttcaccttcagcgaggaaaactcagccctagac
tattttggaaagatgatgaaagcagccgggtacaacttttatggcacagaacggatgtac
agtggcatcagtggtgtggaattggaggcagatattttcattggcattgtatattatcag
cgtctccgtcacatggtctctgacaaatttcaggtgaggactactggtgcaagagataag
gtcacaaaccaaccagttggaggaagaaatattcagggaggcatccgatttggggaaatg
gaacgggatgctcttcttgcacatggcacctccttcctactccatgatcgtctttttaac
tgctctgaccgctcagtagcccatgtctgtatagaatgtggaagcctgctgtctccgtta
ttggagaaacctccacctcactggtcagccacacgacacagaaaatatatctgcaccctc
tgtaagaaaagtgaatctgttgatgtggtgtctgtaccttatgttttccgttattttgta
gctgaattggctgcaatgaatatcaaagtcaaacttgacgtgaaatag
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integrated database retrieval system
