Polypterus senegalus (gray bichir): 120523044
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Entry
120523044 CDS
T08668
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
psex04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120523044 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120523044 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120523044 (parp4)
03036 Chromosome and associated proteins [BR:
psex03036
]
120523044 (parp4)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120523044 (parp4)
Enzymes [BR:
psex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120523044 (parp4)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120523044 (parp4)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120523044 (parp4)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120523044 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
BRCT
BRCT_2
VWA
VWA_2
PTCB-BRCT
VWA_CoxE
tRNA-Thr_ED
Motif
Other DBs
NCBI-GeneID:
120523044
NCBI-ProteinID:
XP_039599922
LinkDB
All DBs
Position
2:74626773..74757403
Genome browser
AA seq
1807 aa
AA seq
DB search
MGIFKDCSIVLELKNLPIKEKNNLKALIKENGGSVTYVINKKCTHVVANCLDHLSPNRKK
SIDKFQIPVVTTNYIFKCCDEKNLLNVQEYTSAETILHKQSKDNAVEIDIIPLLDEFPRK
PLEIVKENSVDLFRIYTENEPNLPKFSSEFEVAKYAVLLKTTGSEISLAVIEVQCATETQ
WCPFRVTCYSGELQNEQVKRKKKELIFSSTSEVALRSFGFFMKNLQKDGFVLQKKLPAAV
KLLASEKLQKVLLEEALSSSIISQEVGVFVELIWTAAHGCLNEVLSCPINSISPNDVIRA
EGVLHRARKAMESSCSFSDLKIIMSEFFRIIPHKCIAEPFINMRTISQKQDLCQLIRDIV
NVSESTFWSPTPSSLAKYRALRCSIEHLEPETEEYFNLTKLLTPHGKSFLPVTLHRIFHV
SRVDEMLDFQRKLGNVQLLFHASSLSKFVGILSRGLLLPKVAVEQHGIARTDVGNLGSGI
YFSNDIRTAMKYSSPNEIDGTCILVVCEVALGLCKQLTQKDCSLTSAPDEYHSVHGVRNT
PQKPTEFEDDEFVVYNINQIQMKYVIQFCLDKDSITIYEPQVNLTGEEVIPYELDAQVTD
TDSNKEHINPLLGVTAGLQDSSGNQIPLESVHIKGRMMDLLAQVVVFQTYTNHSSTPIEA
KYVFPLDETAAVCGFEAFINGKHVIGEVKEKEEARQEYQQAIREGHGAYLMDQDAPDVFT
ISVGNLPPEATVLIKITYVTELSVNFGLISFRLPGSVAPWQQSKALNEKTQDTLEKVKVS
EFQKEGGFMLDMSVEMPYEIQEIWSETHNIDLKKTECKAVIRTKEGSSLGSDGFSLSVRL
SELYLPRMWVEKHPDKESQACMLVFCPAFDSNSLPEGSEVVILLDNSNSMKGSKLQEAKQ
IAVLALEALECKTNVIMFGTDYNELFPYPEDIHTGLAAAKTFILGTPELMGNTDLWRPLR
NLSLLPPSKGLRNILLISDGHLQNEGLTLRLVTENVCHTRVFTCGIGSTANRHMLRTLAH
SGGGAYEFFDTKTKYTWKDKISSQVKRMASPACTSVSVKWQQFNQHNPKPIQAPAQLHSL
FSENQLLLYGFVPHCTQATLYGKISNQEIETMVSTTELQKTKGTMLHKLTARALIRDYEE
GILHADGIEHEAKKSELKPFIISLSKEYSIVTQYTSFIAVEKRDVDKQQDFSETNITELI
SQEDIDCLPYLGWEQDLKAASIFSEEDSDSGSSSYVLDYLNLFSDIHPCAEDVEDISLKM
DFRSGFAEYCEMDSFVQDYREISSDIFVSKRAVKEIIPAVDGLPLPPPPPPPPPPDLPEG
MGMSRIILHDMSTECSTSEPLESFLLHRGSSVRANRRKSRRYIPAFDEGSDHMAQGLHMK
LSGLSGISSTSGPPASILPHNVPFGLTQAREQDLQDSLPLCAKPCLPAQQMIQPSPPLLG
VVVPKTPKFGQAMTQKSPQITGIMSFGERQIQQSPPIAESAFFKSSFNQQRLSFPMITGK
SSFHQPSPPVPGQLFGQATIQPSLLFARSEADQCDLIQPSRSFTRYMSPAPGAQPVLHSS
LPLFEKMHCAGFSGGFGASTNIMLKPSKSSYLLPEFMHTDPQAAAVKAQRRKQDLVSWAN
IFLLQHVDGYWEATSELGALLDVNMDYFANVFLKEKGIMSLGLKAKENILRLLATLLVIQ
LIRYTMQLNGIVLKSLFHLEHNKDESSPYLLSVEKAIKWAKAADKRYPCICSRLQIGRDM
ETTTRQLLNIDPIKENSPLWLFITKQSISGINKPFIFGNSTIFGTSNQQSCLGMGSALGG
FSFETFA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggtatctttaaggactgttccatagttctggaactgaaaaatctaccaataaaggag
aagaacaatctgaaggccctgattaaagaaaatggagggagtgttacatatgtgatcaat
aaaaagtgtacgcatgttgttgcaaattgtttggaccacttgagtcctaacaggaaaaag
agtattgacaagttccagataccagttgttacaacaaactacattttcaaatgctgcgac
gaaaaaaatctgctgaatgtgcaagaatatacttctgctgaaaccattcttcataaacaa
agtaaagacaatgcagttgagattgacattattccacttctcgatgaatttcctagaaaa
ccattggaaatagtgaaagaaaactctgtggaccttttcagaatttacacagaaaatgaa
cccaatttaccaaagttttcctctgaatttgaagttgcaaaatatgctgttctgcttaag
acgactggaagtgaaatatcgcttgctgtaatagaagttcagtgcgcaacagaaactcaa
tggtgtcctttccgtgtaacttgctatagtggagaacttcaaaatgaacaggtcaagagg
aagaagaaagagctgattttttcttccacttcagaagtagctttgagatcatttggattc
ttcatgaagaatcttcaaaaagatggatttgttttgcagaaaaagctaccagctgctgtg
aaattattggcttctgagaaactgcaaaaggtgctacttgaagaagccttgagcagcagt
attatctctcaagaagtaggagtttttgttgaattgatttggacagcagcacatggatgc
cttaatgaagtgctttcttgtcccatcaacagtatcagcccaaatgatgtaatcagagca
gaaggggttcttcatcgtgcacgaaaagctatggaaagtagttgcagtttttctgacctg
aaaatcatcatgtctgagttcttccgtatcatcccacataaatgtattgctgaaccattc
atcaacatgaggacaatttcacagaagcaggacctatgtcagttaattagggatattgtc
aatgtaagtgaatccactttctggagccctacaccctcatcacttgccaaataccgagcc
ctgaggtgcagcattgaacatttagaaccagaaacagaagaatactttaaccttacaaaa
cttttaacaccacatggtaaaagttttcttccagtgactcttcaccgtattttccacgtt
agtagagtggatgaaatgcttgacttccagagaaagctcggcaatgtgcagcttctgttt
catgcatcttccttgagcaaatttgttggtattctgtctcgtggtttgctgttgccaaag
gtagcagttgaacaacatggaattgctagaacagatgttggtaatcttggaagtggcata
tacttcagcaatgacataagaacagccatgaaatattcgtcacctaatgaaatagatgga
acgtgcatactggtggtttgtgaagtggcactgggtctgtgcaagcaactaacccagaaa
gattgtagtttgacaagtgcaccagatgaataccacagtgtgcatggagtccgtaacaca
ccacagaaacccactgaatttgaggatgatgagtttgttgtatataatatcaaccagata
caaatgaagtatgtgatccagttttgtttggataaagacagtatcactatatatgagcca
caagttaaccttactggtgaagaagtcattccatatgagttggatgcccaagtcacagac
actgatagcaacaaggaacatataaacccacttctcggggtgactgctggtcttcaggac
agctctggaaatcaaattcctctagaaagcgttcatattaaaggtcggatgatggatctt
ctggcacaggtggtggtttttcagacatataccaaccattcttcaactccaatagaagcc
aagtatgtttttccattggacgaaacagcagctgtgtgtgggtttgaagcatttattaat
ggaaagcatgtaataggagaggttaaagagaaagaagaggcaagacaagagtatcagcaa
gcaattagagagggtcatggagcttaccttatggaccaagatgcacctgatgtgtttaca
attagtgttggaaatctcccaccagaagctacagttcttatcaagatcacgtatgtaact
gaactttctgtgaattttggattaatcagtttccggttaccaggaagtgtggcaccatgg
caacagagcaaagccttaaatgaaaaaacacaggacacattagagaaagttaaagttagt
gaatttcagaaggaaggggggtttatgttggatatgtctgttgaaatgccatatgaaatc
caagagatctggtctgaaacacacaatattgatcttaagaaaacagagtgtaaagctgtc
attagaaccaaggagggcagttctttaggatctgatggtttcagcctcagtgttcgcttg
tctgaattatacctgcctaggatgtgggtggagaagcacccagacaaagagagtcaggct
tgcatgttagtattttgcccagcgtttgactccaacagcttgcctgaaggtagtgaagtt
gtgatcctcttggacaattccaattccatgaaagggtcaaagctgcaggaggccaaacaa
attgcagtcctggccttggaggcacttgaatgcaagactaatgttatcatgtttggaaca
gattataatgaactttttccctatccagaggatattcatactggccttgctgctgctaaa
acatttatacttggtacaccagaattaatgggtaacactgatctgtggagacctttgcgc
aatttaagcttattacctccatcaaaaggtcttcgtaacatacttttgatatctgatgga
cacctacaaaatgaaggacttaccctgaggcttgttacagaaaatgtttgccacactaga
gtctttacttgtgggattggctccacggcaaatcggcatatgcttagaaccttggctcac
agtggaggtggagcttatgaattttttgacacaaaaacaaagtacacttggaaagacaag
atttcctctcaggtgaaacgaatggcatcacctgcttgcacttctgtgtctgtaaagtgg
cagcaattcaatcaacataacccaaaacctatccaggccccagcacagctgcactcttta
ttcagtgagaatcagttactcctttacgggtttgtgccacattgcacacaggccacacta
tatggaaaaatcagcaatcaagaaattgagaccatggtgtctaccactgaactgcagaag
actaaagggacaatgcttcataaacttacggcaagagctctaatcagagactatgaggaa
ggaatactacatgcagatggtattgagcatgaggcaaagaaatctgaattaaaaccattc
attatttcactgagcaaagaatactccatagtgactcaatatacaagcttcatagcagtt
gaaaaaagggatgtggataaacaacaagatttcagcgagactaatataacggagctgatc
tcacaagaagatattgactgtttaccctatttaggttgggaacaggatttgaaggcagct
tcaattttctctgaggaggactctgacagcggatccagcagttatgttcttgactatctt
aacttgttctcagatattcacccttgtgcagaagatgtagaggatatctcattaaaaatg
gatttcagaagtggatttgctgaatattgtgaaatggatagttttgttcaggattaccgg
gaaatttcatcagacatctttgtttctaaaagagctgtaaaggaaataattcctgcagtt
gatgggcttccacttcctcctcctcctcctcctcctcctccccctgatcttccagaagga
atgggaatgtcacgcataatattgcatgatatgtcaacagaatgttcaacttctgagcct
cttgagtcttttcttctacatcgtggttcttctgtacgagcaaacagaagaaagtcaagg
cggtatatacctgcttttgatgaaggttcagatcatatggctcagggtttacacatgaaa
ttgtctggtttgtcaggcatatcttcaacttctgggcctcctgcttctattcttcctcat
aatgttccttttggtcttacacaagcaagggaacaagatttacaagacagtctgcctctt
tgtgctaagccatgtctaccagcacaacaaatgattcaaccaagtccaccattacttggg
gttgtggtaccaaaaacgccaaagtttggacaagcaatgactcaaaaaagtccccagatt
actggaataatgtcctttggagaaagacagattcaacaaagtccaccaattgctgagagt
gcattctttaaatcatcatttaatcaacaacgtttatcatttccaatgataactggaaag
tcatcctttcaccaaccatcacctcctgtcccgggtcaattatttggacaagccacgatt
caaccaagtctactgtttgctaggagtgaggctgatcagtgtgatttgattcaaccaagt
cggtcatttacaagatatatgtcacctgcacctggagcacaaccagtactccattcaagt
ctgcctctttttgaaaagatgcattgtgcaggtttttccggtggatttggtgcttctaca
aatataatgttgaaaccttctaaatcctcataccttctcccagagtttatgcacactgat
cctcaagcagctgccgtgaaagcacaaagaagaaaacaggatctggtatcttgggcaaat
atatttctactccagcatgtggatggctattgggaagctacttcagaactaggagcctta
ctagatgtcaacatggattattttgccaatgttttcctgaaagaaaagggaatcatgtct
ttgggtttgaaagcaaaggaaaatatcctgagactccttgccacacttctagtgattcag
ctcatacgttacaccatgcaactgaacggcattgtcctgaagtctctcttccatctggag
cataacaaagatgagagttcaccttatctgttatctgtggagaaagcaatcaagtgggct
aaagcagcagacaaacgctacccatgcatttgcagtagacttcagattggaagagatatg
gaaacaacaacacgacaactcttgaacattgacccaataaaggaaaactccccattatgg
ttgtttatcaccaagcagtctataagtgggataaacaagccatttatatttggaaactcc
accatttttggaacctcaaatcagcaatcatgtcttggtatgggaagtgcgttaggtggt
ttcagttttgaaacatttgcataa
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integrated database retrieval system
