Polypterus senegalus (gray bichir): 120532405
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Entry
120532405 CDS
T08668
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
psex03420
Nucleotide excision repair
psex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120532405 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
120532405 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120532405 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120532405 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120532405 (cdk7)
03019 Messenger RNA biogenesis [BR:
psex03019
]
120532405 (cdk7)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120532405 (cdk7)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120532405 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
120532405 (cdk7)
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: CMGC group
CDK family
120532405 (cdk7)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120532405 (cdk7)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120532405 (cdk7)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120532405 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
RIO1
APH
FTA2
Motif
Other DBs
NCBI-GeneID:
120532405
NCBI-ProteinID:
XP_039614302
LinkDB
All DBs
Position
7:25700415..25732400
Genome browser
AA seq
345 aa
AA seq
DB search
MAVDVKARSKRYEKLDFLGEGQFATVYKAKDKHTNTIVAIKKIKLGHRLEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYMLM
TLQGLEYMHQHWILHRDLKPNNLLLDENGVLKIADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRVPFIPGDTDLDQLTRIFEALGTPTEEKWPGM
TSLPDYISFKMFPGTPLEHIFSAAGDDLLELLQGLFTYNPCTRTTATQALKKRYFSNRPG
PTPGPQLPRPNCSTEALKEQQNIHLGIKRKRDGTEQGTLAKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatgtaaaagcacgatctaaaagatacgaaaaacttgattttcttggggag
ggtcagtttgctacagtttataaagcaaaggacaaacatacaaatactatcgttgctatt
aagaagattaagcttggccatagattagaagctaaagatggtattaataggacagccctt
cgagaaatcaaacttcttcaagaattaagtcatccaaatatcattggtctccttgatgct
tttggacataaatctaatataagtcttgtttttgacttcatggaaacagatttagaggtc
ataatcaaagacacaagcctcgtattaactcctgctaatataaaagcatacatgttaatg
acgcttcaaggtcttgaatacatgcatcaacactggattttgcacagggacttaaaacct
aataatttgttacttgatgaaaacggagttttaaaaattgctgactttggtttggcaaaa
gctttcggaagtcccaacagggtctatactcatcaagttgtaacaagatggtacagatca
ccagagctcttgtttggtgcaagaatgtatggagttggtgtggacatgtgggcagtaggt
tgcatattggctgaattactccttagggtgccatttatacctggagacactgatctagat
cagttaacacgtatatttgaagcactgggcactccaacagaggagaagtggcctggtatg
actagtctgcctgactacatatcattcaaaatgtttcctggaacaccactggaacatata
tttagtgcagctggagatgatttactagagcttttgcagggactgttcacatataatccc
tgtaccagaacaacagcaactcaggcattgaagaaaaggtacttcagtaacagaccaggt
cctactccaggaccacagctaccaagaccaaattgttcaacagaagccctgaaagaacaa
caaaacattcacttgggtattaagagaaaacgagatggcactgagcaaggaacccttgct
aagaaactagttttctga
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