Polypterus senegalus (gray bichir): 120532824
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Entry
120532824 CDS
T08668
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04210
Apoptosis
psex04218
Cellular senescence
psex04620
Toll-like receptor signaling pathway
psex04621
NOD-like receptor signaling pathway
psex04622
RIG-I-like receptor signaling pathway
psex04623
Cytosolic DNA-sensing pathway
psex04625
C-type lectin receptor signaling pathway
psex04920
Adipocytokine signaling pathway
psex05132
Salmonella infection
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120532824
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120532824
04218 Cellular senescence
120532824
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120532824
04621 NOD-like receptor signaling pathway
120532824
04622 RIG-I-like receptor signaling pathway
120532824
04623 Cytosolic DNA-sensing pathway
120532824
04625 C-type lectin receptor signaling pathway
120532824
09152 Endocrine system
04920 Adipocytokine signaling pathway
120532824
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120532824
09171 Infectious disease: bacterial
05132 Salmonella infection
120532824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120532824
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120532824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120532824
NCBI-ProteinID:
XP_039615162
LinkDB
All DBs
Position
7:complement(122610645..122756106)
Genome browser
AA seq
988 aa
AA seq
DB search
MNDEDVYLGVTHPIFEMDAFDPLIPVEPLNFPNMPSYNSPRIADGPYLEIIEQPKQRGFR
FRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGPGRIVVQLVTCSKEVHLHAHSLVGK
QCDKGICIVDIPPKDSCVSFPNLGILHVTKKNVAKTLEDRMIEACKMGFNAGIRIHQEID
CLSAEGRIPRDLNEYQKSLISNAAINQAKDMDLSVVRLMFTAFLPDSDGSYTRRLDPVIS
DPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDETGGFWEA
FGDFSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDK
EEVQRKRQKTLPSFPDYGPPGAGSGGIYRGGGGGGGGGNTGGPGGGFNFQGFPNYNNFGT
GYFPPGSGGSGPGLKHAARGPPNIDSDDDSDLDEDRWPPGNSVISCQKTLEPGAATLKEE
NTSDDDVKHLQESEKVITEDAVTPDLQFTEKEAQLALHHACALFNYAITGDIKELLAVQR
PLIATQDENGDTGLHLGVIHSKSEAVKNLADVLAGIPGEDVINMRNDLYQTPLHLAVITE
QLTVVESLLKAKADVSLTDRNGNTALHLAAKEGQAAILGHLLQYKEVKLLLNQPNSNGLY
PIHLAVLANSLSSVRQMLAAGVDVNAREQSSGRTALHLAAEQENVSLAGSLLLEGNAHVD
SCTYDGSTPLHIAVGRKSAKLTALLKAAGADIYKENFEPLYEIHNKYCEDQQEEDDEGFV
PGTTPLDMALSDEIYDILNGKEYKPKMDLPVFLPQGDMNHLSKEARYELCKALEFPKQTW
EVLAQKLGLGVLNSAFRSSTSPAKTLLDSYEVSGGTIIELLDGLKAIENVKAVEIVQKAL
IGLVYSPDEDEELSESVPYLQQQIVGQGAGQIQDLKNNANEDGGVCDSGVETSFRKLSCM
SEESLHSIVDDVLLGDQPVFTLRSSMDI
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaagatgtatatctgggagttactcaccctatatttgaaatggatgctttt
gatccactgattccagtggagcctttaaattttcctaatatgccatcttataattcacca
cgaatagctgatgggccgtacctggaaatcatagaacagcctaaacagagaggctttcgt
tttcgctatggctgtgaagggccatctcatggtggactacctggagcttcaagtgaaaag
aatagaaaatcttatcctcaagtcaagatttgcaattaccagggaccaggtagaattgtg
gttcagctggttacttgttccaaagaggtacatttgcatgcacacagcttggttggaaag
cagtgtgacaaaggaatatgcattgttgacataccacccaaggattcatgtgtcagtttc
ccaaacttggggattctccatgtgactaagaagaatgttgccaagaccctggaggacaga
atgatagaggcatgtaaaatgggctttaatgcaggaattcgaattcaccaggagatagac
tgtttatcagcagagggaaggatacctagagaccttaatgaataccaaaaaagtctaatc
agtaatgcagcaatcaatcaagcaaaagatatggatctcagtgttgtcagactaatgttt
acagcctttctaccagacagtgatggaagctatacaaggcgattagaccctgttatttct
gacccaatatacgacagcaaagcccctaatgcatctaatttaaagattgtgagaatggat
cgaactgctggttgtgtcactggaggagaagaggtctatttactttgtgataaggttcaa
aaagatgatatccaagtacgattctatgaagaagatgaaactggaggtttttgggaagca
ttcggggacttctctcctacagacgttcacaggcagtttgctattgtcttcaagactcca
aaatacagagacctcaatttacaaaagccaacatcggtatttgtccagctaaaaagaaaa
tctgacaatgaaacaagtgaaccaaaacccttcacataccatccccagataatagacaag
gaggaggtccagaggaagagacagaagactctacccagtttcccagattatggaccacca
ggggctggatcaggaggaatttatagaggaggtggtggtggaggaggaggcggcaacact
ggtggccctggagggggatttaatttccaaggattcccaaactacaataatttcggaact
ggttattttcctccaggctcaggtggaagtggtcctggactaaaacatgcagcacgaggt
ccacctaacattgacagtgatgatgacagtgatctggatgaggacaggtggccaccaggc
aattcagtgatttcttgtcaaaaaacattagaacctggtgctgcaactttaaaagaggag
aatacatcagatgatgatgtgaaacatttgcaagaatctgaaaaagtgataacagaagat
gctgttactcctgacctgcagttcactgaaaaggaagctcagcttgcactgcatcatgct
tgtgctcttttcaattatgctatcacaggggatataaaagagttactggctgttcagaga
cctctcatagctactcaggatgaaaatggagatacgggcttacacctgggtgttatccat
agcaaaagtgaggcagtaaaaaatcttgcagatgtgttagccggtattcctggtgaagat
gtcatcaatatgaggaatgacctctaccagactcccttgcacttggcggttatcacagaa
caactgactgttgtagagtctctgttgaaagccaaagctgacgtatctctcactgacaga
aatggaaacacagctttacacctggctgccaaagaaggccaggcagccattctgggacat
ttgcttcagtataaagaagtaaaactgttgcttaatcaaccaaatagtaatggtttatac
ccaattcaccttgcagtacttgcaaacagcctttcatcggtgaggcagatgctggctgct
ggagtggacgtgaacgcccgtgaacagagctcaggacgaacagcgctgcaccttgcagca
gagcaagaaaatgtctctctagcaggaagccttcttcttgagggtaatgcacatgttgac
tcctgcacatatgacgggtccactccactacacatcgcagttggaaggaagtctgctaaa
cttaccgcattattgaaagctgcaggtgctgatatttataaagagaattttgagcccttg
tatgaaatacataataaatactgtgaagatcaacaggaagaggacgatgaaggttttgtg
cctggaacaactcctctggacatggccctttctgatgagatttatgatattctaaatgga
aaagaatataaaccaaagatggacttgccagttttccttccacaaggagatatgaaccat
ctctcaaaagaagcaagatatgaattgtgtaaagcattggaatttccaaagcagacatgg
gaggtcttagcacaaaagttaggtttaggtgtacttaacagtgccttcagatcaagtaca
tcgccagcaaaaacacttctggacagctatgaggtttctggtggaacaatcattgagcta
ctggatggcctaaaagcaatagaaaatgtcaaggctgttgaaattgttcagaaagctctc
attgggttagtatatagtccagatgaagatgaagaactttcagaaagtgtcccttatctt
cagcaacaaatcgttggccagggtgctggacaaattcaagacttgaagaacaacgcaaat
gaagatggtggtgtatgtgacagtggcgtagaaacatccttccggaagctcagctgcatg
tctgaggagtcgctgcacagcattgttgatgacgtgctactgggtgaccagcctgtcttt
actttaagaagcagtatggatatctga
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