Polypterus senegalus (gray bichir): 120535223
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Entry
120535223 CDS
T08668
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120535223 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120535223 (mmp2)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
120535223 (mmp2)
Peptidases and inhibitors [BR:
psex01002
]
Metallo peptidases
Family M10
120535223 (mmp2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Astacin
Reprolysin_4
Reprolysin_5
Reprolysin_3
DUF4953
Motif
Other DBs
NCBI-GeneID:
120535223
NCBI-ProteinID:
XP_039618859
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All DBs
Position
9:37834148..37899501
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AA seq
660 aa
AA seq
DB search
MRSRVSHAWSPFGLLFNVVLLLYIAVRRSSAAPSPIIKFPGDDSTPKTDKEVALHYLNKF
YGCPQDRCNLMVLKDTLKQMQKFFALPETGEIDQKTVDIMKKPRCGVPDVANYNFFPRKP
KWEKNLITYRILGHTPDLAEDVVDDAFARAFQVWSDVTPLKFSRIMDGEADIMINFGRWE
HGDGYPFDGKDGLLAHAFAPGHGIGGDSHFDDDEYWTLGDGPVVKVKFGNADGEFCKFPF
SFMGKEYNSCTSEGREDGFLWCSTTYNFDDDQKYGFCPHELLFTLGGNGEGAPCKFPFTF
EGTTYNSCTTEGRSDGYRWCSTTEDYDRDKTYGFCPETAMSTVGGNSDGAPCVFPFTFLG
NKYDSCTTSGRSDDKMWCATSHSYDDDRKWGFCPDQGYSIFLVAAHEFGHALGLEHSQDP
GALMAPIYTYTKNFKLSYDDIKGIQELYGFPTDKPLPPTQGPVTPMDLCQEDIVFQAVAQ
IRGETFFFKDRFLWRTSNPRSKPTGPMLVATFWSDLPDKLDAAYENPLEEKTVFFSGNQY
WIYSASTLERGHPKKLSTLGLPADLQKVDAAFSFGKNKKTYIFAEDKFWRYNEAKKKMDP
GFPKLIADAWNGVPDSLDAALEFQGSGFSYFFKDWYYLKLDDRTLKIVKVGNVKTDWLGC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcgggtttcgcacgcttggagtccatttgggcttttgtttaatgtagtgcta
cttctttacatcgctgttcggagaagttcagcggcgcccagtccaatcataaagttcccg
ggggatgacagcacaccgaaaacggacaaagaagtggcgttgcattacctgaataagttc
tatggatgtccccaagacagatgtaatctaatggtgctgaaggacactttaaagcagatg
caaaagttttttgccctaccagagactggagagattgaccaaaagacagtggacatcatg
aaaaagccaagatgtggtgtcccagatgtggcaaattacaacttctttccacgcaaacca
aaatgggagaaaaatttaatcacatacaggattttgggccacactcctgatttggccgag
gatgtggttgatgatgcatttgcacgtgctttccaagtatggagtgatgtcacacctctc
aaattttctcggattatggatggagaagcagatattatgatcaattttggacgttgggaa
catggtgatggatatccttttgatgggaaggatggccttttggcacatgcttttgcacct
ggacatggaattggtggagactctcattttgatgatgatgaatactggactcttggagat
ggcccagtggtgaaagtaaaatttggtaatgctgatggagagttctgcaagttcccattt
tcattcatgggaaaagaatacaacagctgtacatctgagggtcgtgaggatgggtttctt
tggtgctccaccacttacaactttgatgacgatcaaaagtatggattttgtccccatgaa
ttgttgtttactctgggaggaaatggagaaggagcaccctgcaagttcccattcaccttc
gaaggcacaacatataatagctgcacaacagaggggagaagtgatggctaccgttggtgc
tctacaacggaggattatgaccgtgataagacttatggattctgtccagaaacagctatg
tcaacagtgggtggaaactctgatggggctccttgtgtcttccctttcaccttccttggt
aacaaatatgactcctgtacaacatcaggccgcagtgatgacaagatgtggtgtgcaact
tctcatagctatgatgatgatcgcaaatggggcttttgtcctgaccaaggctacagtatt
ttcttggttgctgcccatgagtttggccacgcattaggcctggagcactcgcaggaccca
ggggcattaatggctccaatctacacctacaccaagaacttcaagctgtcatatgatgac
atcaaaggaatccaagagttatacggattcccgacagataaaccacttccacccacccaa
ggtcctgtgactcccatggacctatgtcaggaggatattgtctttcaagcagtggctcag
atccgtggagaaacatttttcttcaaggatcgattcctttggaggaccagtaatcccaga
tctaagcctacagggcctatgcttgttgccactttctggagtgacctgccagacaaactg
gatgcagcatacgagaatccactagaagaaaaaacagtcttcttttcaggaaatcagtac
tggatttactctgcaagcacattagagagagggcaccccaagaaactttccactctgggt
ctgccagctgacctacaaaaagttgatgctgcattttcatttgggaagaataagaagaca
tatatctttgcagaagataagttctggagatataatgaagcaaagaaaaagatggatcca
ggcttccccaagctgattgctgatgcctggaatggagtgccagatagcttagatgcagcc
ttggagtttcagggcagtggatttagttacttcttcaaggactggtactatcttaaattg
gacgaccggactctgaagattgttaaagtaggcaatgtgaaaacagactggttaggctgc
tga
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