Polypterus senegalus (gray bichir): 120537937
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Entry
120537937 CDS
T08668
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00900
Terpenoid backbone biosynthesis
psex01100
Metabolic pathways
Module
psex_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120537937 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psex01006
]
120537937 (fdps)
Enzymes [BR:
psex01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120537937 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120537937 (fdps)
Prenyltransferases [BR:
psex01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120537937 (fdps)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
120537937
NCBI-ProteinID:
XP_039623161
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All DBs
Position
1:201539794..201563653
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AA seq
354 aa
AA seq
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MDNHAIKKQQTKADTEHFDQLFVQIVNDLTEQDLNHPEVGDAIRRLKQVLEYNAPGGKRN
RGLSVIASYRELVTPEQLTPENLQRALVVGWCIELLQAFFLVADDIMDASLTRRGQPCWY
KTDGIGLDAVNDSFLLEATIYRLLKKYCRGEPFYINLIELFLETSYQTELGQALDLITAP
PNQIDLTRFTDDRYKAIVKYKTAFYSFYLPVAAAMYMAGIDDEMEHNNAKAILLEMGEFF
QIQDDYLDCFGDPAITGKIGTDIEDNKCSWLVVEALKRVTSEQRQVLELCYGRKDSESVN
RVKSLYADLKMPKVYSEYEDSSYQRLMGLIERHANKLPHSIFLSFAQKIYKRNK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggataaccatgctatcaaaaagcagcagactaaagctgacaccgaacactttgaccag
ctcttcgttcagatagtgaatgacttgacagaacaggaccttaatcatccggaagtggga
gatgcaattagacggctgaagcaggtcttggagtacaatgcccccggaggtaaaaggaat
cgtggcctgtcagtcattgcttcatatcgggagttggtcactcctgagcaactcacacct
gagaacctgcagcgagccctggtggttggctggtgcattgaattgctacaagcctttttc
ctagtggcagatgacattatggatgcatctttgaccagaagggggcagccatgttggtat
aagaccgatggtattggattagatgctgtcaatgactcctttttgttggaagccaccatc
taccggctgctaaaaaagtactgcagaggagaacctttctatattaacctcatcgagctc
ttcctggaaacaagttatcagacagaactaggtcaagctttggatctgatcacagcccca
cctaaccaaatagatttgacacgattcactgatgacaggtataaagcaattgtcaagtac
aagactgctttctattcattttacttacctgttgctgctgccatgtatatggctggaatt
gatgatgaaatggagcacaataatgccaaagcaatcctcctggagatgggagaatttttc
cagattcaggatgactatctcgactgctttggggatccagcaataacaggaaagattggc
accgacattgaagataacaagtgcagctggctagttgtagaggctttgaagagagtcact
tcagaacagcggcaggtgctagaattgtgctatggccgcaaggacagtgaaagtgttaat
cgcgtcaagtctctttatgcagacctgaaaatgccaaaggtgtacagtgaatatgaagac
agcagctaccagcgtctaatgggtctgattgaacgtcatgccaataaacttccccactca
atcttcttgtcttttgcacagaaaatttacaaaagaaacaaatga
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