Polypterus senegalus (gray bichir): 120539965
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Entry
120539965 CDS
T08668
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00270
Cysteine and methionine metabolism
psex01100
Metabolic pathways
Module
psex_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120539965 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120539965 (dnmt1)
03032 DNA replication proteins [BR:
psex03032
]
120539965 (dnmt1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120539965 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
psex02048
]
120539965 (dnmt1)
Enzymes [BR:
psex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
120539965 (dnmt1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120539965 (dnmt1)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
120539965 (dnmt1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120539965 (dnmt1)
Prokaryotic defense system [BR:
psex02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
120539965 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
CAP-ZIP_m
Motif
Other DBs
NCBI-GeneID:
120539965
NCBI-ProteinID:
XP_039626298
LinkDB
All DBs
Position
12:complement(154121904..154177845)
Genome browser
AA seq
1502 aa
AA seq
DB search
MPAKTSVSLPEDIRKRLQALEKNGKGLSEKDCIKEKLSLVLGFLQADAQNQLTDLETKLQ
NEELSEEGYISKVKVLLGKVCSVENGAMNGCLENGAHASDEDSAEGGKPEEGVMEVEEEE
TAQIKSPSGRKSQTGRKSRANGDVKKSPASRVTRNSGKQQTILSMFSKASSKRKSEEVIP
DDEPAVKTENEDNMKEQVQDEKRSKLESNDKPDTKESQVQKTVHPAKTPPPKCQECRQYL
DDSDLKYFQGDPEDALDEPEMLTDERLSIFDANEAGFESYDDLPQHKITNFSVYDKKGHL
CPFDSGLIEKNVELYFSCVVKPIYDDNPCLDGGIPAKKLGPINAWWITGFDGGEKALIGF
TTAFADYILMDPSEEYAPIFALMQEKIYMSKIVVEFLQKNVDATYEDLLNKIETTVPPAG
LNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSMLLY
WRAARRQAIRHPTKIEKDKGPTKATTTKLVYQIFDTFFSDQIDQNDKENTVKRRRCGVCE
VCQAPDCGKCNACKDMIKFGGSGRSKQACLKRRCPNLAVKEAEEDENIEEEDVLPVKSTS
KMLMQAKKKKQSKSKITWIGKPVETIGKKDYYMKACIEDEIVEVGDCVSVSPDDPSNPLY
LARITALWEDDNGKMFHAHWFCRGTDTVLGESSDPLELFLVDDCEDMQLSYVYGKVNVVH
KTPSKNWFMEGGTDEDFKVGDDGKSYFYQLWYEPDYARFETPPSVVPLDDCKYRFCSSCV
RQEEDKERCTPKVLDPLEENDAAKAYYALACLNGQQYRVGDGVYLLPDAFSFSVKSGSPV
KRPQRKEDVDEELYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCSKRSNGKANESDIK
LRVYKLYRPENTHKGVKSSYHTDINMLYWSDEEATVDFKDVQGRCFVEYGEDLTESVQEY
SSRGLDRFYFLEAYNPKTKSFEDPPNHARSAVGKGKGKGKGKGKGKGKSSAASEPESQEP
KVPPLRSLDVFSGCGGLSEGFHQAGISKTEWAIEMWDPAAQAFRLNNPGTTVFTEDCNVL
LKLVMAGEHSNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSY
CDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAI
ILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDDKKYVSNVTRLNSAPFRTITVRDTMSDL
PEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGS
DWRDLPNIEVRLSDGTTTKKLRYTHQDKKNGRSGTGALRGVCACAGGKPCDPADRQFNTL
IPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECSR
SQGFPDTYRFFGNILDKHRQVGNAVPPPLAKAIGQEIKQCLLEKMKEEQTETLKQEKMET
TD
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaagacctccgtgtctcttcccgaggacatcagaaagcggcttcaagctttg
gagaaaaatggcaaaggactttcggaaaaggactgtataaaagaaaagctgagtttggtg
cttggcttcttgcaagcagatgcccaaaatcagctgactgatctggagacaaagctacag
aatgaggaactttctgaggagggttacatttccaaagtaaaagtgctgcttggtaaagtt
tgttcagtggagaacggggcgatgaatggctgcttggagaatggtgcccatgccagtgat
gaagattctgcagagggtggaaagccagaggaaggagtcatggaagttgaagaggaggag
acggcccaaataaagtccccaagtggtcgcaagtctcaaactggcaggaaaagccgggct
aatggggatgtcaaaaagtctcccgccagtagagtcacaaggaactctggcaaacagcaa
acaatcctctccatgttttccaaagcctcttctaaacgcaaatctgaggaggtaattcct
gatgatgagccagcagtaaagaccgaaaatgaggataacatgaaagagcaggtgcaagat
gaaaagagatcaaagctggagtctaatgataagcctgacactaaagaatcccaagtacaa
aaaacagttcatcctgcaaagaccccaccacctaaatgtcaagagtgcagacagtacttg
gatgactctgatctaaagtactttcaaggagatcctgaagatgcccttgatgaacctgaa
atgctgacggatgagcgtctttctatttttgatgctaatgaagctggctttgagagttac
gatgacctgccacagcacaaaataacaaactttagtgtctatgataagaagggccatctc
tgtccctttgattctgggctcattgagaaaaacgtcgagctgtatttcagctgtgttgtg
aagccaatctatgatgataacccatgcttggatggtggtattccagccaaaaagcttggc
cccatcaatgcatggtggatcactggttttgatggtggagaaaaagccttgattggcttt
acaacagcttttgctgactatatccttatggaccccagtgaggaatatgcaccgatcttt
gctcttatgcaggagaaaatttacatgagtaaaatagttgtggagtttctgcaaaagaat
gtggatgcaacttatgaggatctactcaacaaaatagagacaactgtgccccctgctggt
ttaaatttcaacagatttacagaagacactctcctgcgtcatgctcagtttgtggtggag
caagtagagagttatgatgaggccggagactcggatgagcaacctatcattgtcaccccc
tgtatgagagacctgatcaaattagctggtgtaactcttggcaaaagcatgttactatac
tggcgagctgctagaagacaggccattcgtcacccaaccaaaatcgaaaaggataagggt
ccaaccaaagccactaccaccaagctggtataccagatctttgataccttcttctctgac
cagattgaccagaatgacaaagagaacactgttaagcgcagacgatgtggggtttgtgag
gtttgccaggctcctgactgtggaaagtgcaatgcatgcaaggatatgatcaagtttgga
ggaagtggtcgaagcaagcaagcctgcttaaagagaaggtgtccaaacctggcagtgaaa
gaagcggaggaggatgagaatattgaagaggaggatgttcttccagtcaagagcacttca
aagatgctaatgcaggccaaaaagaagaaacaaagcaagagcaaaataacatggattggt
aaacccgtggagactataggcaagaaagattactacatgaaagcttgcattgaagatgaa
attgttgaggttggtgattgtgtatcagtcagcccagatgatccctcaaatcctctgtat
ttggccaggattacagccttgtgggaagatgacaatggaaagatgtttcatgcacattgg
ttttgccggggcactgacactgtgttaggagagtcctctgatccccttgagctgttccta
gtggatgactgtgaagacatgcagctgtcatacgtttatggaaaagtcaatgttgtgcat
aaaactccttcaaagaactggttcatggagggaggaacagatgaagattttaaagtgggt
gatgatggcaagagctacttttaccaactgtggtatgagcctgattacgctcggtttgag
acgcctcccagtgttgttcctctcgatgactgcaagtacagattttgctccagttgtgtt
cgtcaggaagaagataaagaacgctgcactcccaaagtattggaccctctagaggaaaat
gatgctgctaaggcctactatgctttggcttgcctaaatggtcaacagtacagagttggt
gatggggtttacctgttgcctgatgccttttcgtttagtgtcaagtcaggaagccctgtg
aaacgccctcaaaggaaggaagatgtggatgaagagctttatccagaatactacaggaag
tcttctgactacattaagggtagcaacctggatgctccagaacctttccgtgttggtcgg
atcaaagagattttctgttcaaagaggagcaatggcaaagctaatgaatcggacatcaag
ttgagagtctataagttatacaggcctgagaacactcacaaaggagtaaaatccagttac
cacactgatattaacatgctatattggagcgatgaagaagccactgtagatttcaaggat
gttcagggacgctgctttgtggaatatggggaggatctaacggagagtgtgcaggagtac
tcaagcagggggcttgatcggttttacttccttgaggcatataatcccaagaccaagagc
tttgaagaccctccaaaccatgcacgtagtgcagttggaaagggcaagggcaaagggaaa
ggaaaagggaaggggaaaggaaaatcctcagcagcaagtgagccagagtcccaggagcca
aaagtgcccccattgcgctctctggatgtgttttctggatgtgggggactttccgaagga
ttccatcaagcaggtattagcaaaacagaatgggcaattgagatgtgggatcctgctgct
caggctttccgtctgaataatcctggcactaccgtattcacggaggactgcaatgtgctg
ctcaagctggtcatggctggcgaacattccaactctctaggacagaagcttcctcagaaa
ggagatgttgagatgctgtgtggcggccctccatgccaaggttttagcggaatgaaccgg
ttcaattctcgtacctattcaaagtttaaaaactccctagtggtgtcctatctcagttac
tgtgactattataggcccaggtttttcttactggaaaacgtgaggaactttgtgtctttt
aagcgttccatggtattaaaactcacactgaggtgtcttgtacgaatgggttaccagtgc
acctttggagtgctgcaggcagggcagtatggagtagcacagactcgtcggcgagctatt
atcctggctgctgcacctggagagaaacttcctcggtatccagagcctctccatgtattc
gcacctcgtgcctgctcccttagtgttgctgtggatgacaaaaaatatgtcagtaatgtc
acaagattaaactctgctccgtttaggaccattacagtacgagacacgatgtctgatctc
ccagagatccgaaacggagcctctgccctggaaatttcctataatggagaacctcagtct
tggttccagaggcagataaggggatcccagtatcagccaattttgcgtgaccacatctgt
aaggatatgagtgcccttgttgctgctcgaatgaggcacattcccttggctccaggctct
gactggcgtgaccttccaaatattgaggttcgtctgtctgatggcacaaccaccaagaaa
ctgcgctacacacaccaggacaaaaagaatggccgtagcggcaccggggcacttagagga
gtctgtgcttgtgctggtgggaaaccctgtgatccagcagaccggcagttcaacacattg
atcccctggtgtttgccacacactggcaaccggcacaaccactgggcgggtctttatggc
agactggaatgggatggcttcttcagcacaacagtcactaaccctgagcctatgggcaag
cagggcagagttctgcatccagagcagcacagagttgtgagtgtgagagagtgttcccga
tctcagggattcccagacacctataggttctttggcaacatccttgacaaacacagacag
gttgggaatgctgttccccctcctcttgctaaagcgattggtcaggaaatcaaacagtgc
ctgctggaaaagatgaaagaggagcagacggagactctgaaacaggaaaagatggagacc
acagactga
DBGET
integrated database retrieval system
