Polypterus senegalus (gray bichir): 120540361
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Entry
120540361 CDS
T08668
Symbol
lamb2l
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120540361 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120540361 (lamb2l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Nuf2_DHR10-like
F5_F8_type_C
Laminin_II
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
120540361
NCBI-ProteinID:
XP_039626991
LinkDB
All DBs
Position
12:complement(45987702..46149170)
Genome browser
AA seq
1834 aa
AA seq
DB search
MIWLLAIVYFAFSVTAQDRPSVPQGCSDGGCYPATGNLLIGRADKLSASSTCGLWTEEEY
CIVSHLQQEDKCFTCDSRKPYDVITKRSHRIESVIYMMDEEMDLTWWQSSNGMEEVNIQL
DLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRSWKPYRYFSYNCTKMFPAIPFRPLHHI
NDVICEERYSDIEPSTEGEVIYKVLDPSIKVKDPYSLEIQELLQITNLRIKFTKLHTLGD
NLLDRRVEVLKKYYYAVYELVVRGSCFCYGHASECTPISGMTGGVEGMIHGRCVCKHNTE
GLNCERCKPFFNDLPWSPAEARNPHTCKECNCNGHSSQCHFDMAVYLATGNVSGGVCDNC
LHNTMGRNCEICKPFYYQDPSRDIRNPAACIACDCDPVGSLDGGICDSHTDLTLGILAGQ
CRCKENVKGIRCDYCKEGFYGLSRNDPVGCQPCNCDPRGITIGEAPCDQISGDCSRKRYV
TGRYCNQCLPEYWGLSHDITGCRSCDCDFGGAYNNRCMMDNGQCPCRPHITSRLCDEVQL
GYFCASLDFYTYEAEHALPYSPEDLQIPGKPRPPADINCLDYMELXDREFGQHRRHQQKR
HRRHRKVRQLQQQPDVEIAHREQGHGRVVTWTGPGFARVKDGAGLVFTIDNIPYSMDYDI
IIRYETESTEDWEAIISITSHSLPMSLRCGNILSSEQTYIVKLLHDQRYIKMPRPFCFES
NNRYMVAIRFQRFGVAERYFNAFILIDSLVLFPKYTELPGFHGNDPLAIHHREEMERYMC
VESFMMVPMPELAEMCIKLLCSISAILHDGAVPCNCDPQGSYSAVCEKIGGQCQCKPNVI
GHRCDQCAPGTYGFGPYGCSPCNCNSQGSESFFCDPVTGQCPCKSQVTGRQCGSCHPGHW
GFPHCRQCHCNGHSEECDPQTGACIACRDHTTGHYCDRCLDGFYGNPILEYGEHCRPCPC
PGNPGSDHFNGISCSLDGTSSQIICNCFPGYSGPRCDKCAPGYFGNPEEHGGECHPCHCS
GNIDTSDPGACDAHTGKCLMCLYNTHGPSCSECKPGFYGNALAHDCRCCTCNSAGTLRTQ
CTGDMCHCDGTTGMCQCRPNVVGKNCDLCAPNHWNFGIPEGCEPCGCHPLNSFRSDCNMF
TGQCHCLPGFGGRTCFDCEANYWGDPNIKCRACDCDPLGSSTPQCDRHTGKCICVEGATG
QKCNQCDRGFTGHFPKCIRCHHCFQQWESIVNHLYEEIRRIEQRIKHIENTGVPSDTLDR
RIQELQEKLVQIQNLLKDRSTEMIFQIVSESTNNLRMEISQIDGQLLQVSDSLNSTRHQD
EQLQNRLHKMETETRDLNNTVKILHDKLQNLLTSGTSEQFENIKMYYYESLEAERRANES
VFGDRSPVAESQETRIKTEDLLNRKKNEFHRTMTAHTKTLKELQNKTKDLDSNLNHLNEK
VCGSMNKEKNGKHNCTTDPCGGAGCRDEFNKRKCGGETCNGAVSSAFKALKVVQNKSSEI
EAIADRLSDVEKELRNIKMIAEEAKSQTQNTLKKAQTTKDEIDESNQKLKEFLKKIKDFL
SEEGADPKNIDLVSRLVLNISLPVTSGNLSEIIRQIRESISSLGNVDQILNSTAKHLKQA
QDLLNEANDAKSRAEDIKEVVNDTKLALETAQMSIDEANRTLKKAQKNIKGINKTTEMIQ
SKFQNINAKQMDAMKRLSELAKNVGLLQNNTDLNRLKASKANISAENAMMEVNSLNEDFQ
EINQKFKELNKTIGGTEGMGDLSSRVNKVKEEAEELLRAANDKIKNVEDLERKFKMNEEK
MQQQAKILKELETTIINIREMIHNNMTHYSSCTS
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgatttggcttttagccatagtttattttgctttcagtgttacggcccaagacaggcct
tcagtacctcaaggttgttcagatggtggctgttatcctgcaacaggcaatctcctgatc
ggtcgagcggacaaactcagtgcttcatccacctgtggcttgtggactgaagaagaatac
tgcattgtcagccatcttcagcaagaagacaaatgctttacttgtgactcccgaaaacca
tatgacgtgatcacaaagaggagccacagaatagagagtgtcatctacatgatggatgaa
gagatggatctgacttggtggcagtcatcaaatgggatggaggaagttaacattcagttg
gatcttgaagcagaattccattttactcatctcataatgaagtttaagacgtttcgaccg
gctgcaatgattattgagaggtctgcagactttggacgctcatggaagccttatcgctat
ttctcatacaactgcactaagatgtttcccgccattccttttcggccacttcaccatatc
aatgatgtcatttgtgaggagcggtactcagatattgagccttctacagaaggagaggtt
atttataaggttctggacccctccatcaaagtaaaggacccatatagtcttgagatccaa
gagctgctccagatcacaaatctgcgaataaagttcaccaaactacacacattgggggac
aatttactggaccgtagggtggaagtgctgaagaaatattactacgccgtctacgaactg
gtcgtgcggggcagttgtttctgctatggacatgcctctgaatgtacacccatttctggt
atgactggaggtgtggagggaatgatccatgggagatgtgtctgcaagcacaacacagag
ggactaaactgtgagcgctgtaaacctttctttaatgatttaccttggagtccagctgag
gctcgtaatccacatacttgtaaagaatgtaactgtaatggacattcaagccagtgccat
tttgacatggcagtatatttagcaactggaaatgtcagtggtggagtctgtgataactgc
ttacataataccatgggacggaactgtgagatatgcaaacccttttattatcaggaccct
tcaagagatatccggaacccggctgcttgcattgcttgtgactgtgatccagttggttcc
ctcgatggtggcatctgtgacagtcacactgatctcaccttgggtattcttgctggccag
tgtcggtgtaaagaaaatgtcaagggtatccgatgtgactactgcaaggagggcttttat
gggcttagcaggaacgatccagttggctgccagccttgtaattgtgaccctcgtggaatc
accattggggaggctccctgtgaccaaatcagcggggactgttcgcgtaagagatatgtc
acagggcgctactgcaatcagtgcctgcctgaatactggggtctcagccatgatattaca
ggatgccgatcctgtgactgtgactttggtggtgcatacaacaaccgatgcatgatggat
aatggccagtgcccttgtcgtccacatattaccagtcgactgtgcgatgaagttcagttg
ggctatttttgtgcatccctggatttttacacttatgaagcagagcatgctttaccgtat
tccccagaagatcttcagatacctggaaaaccgagaccaccagcagatattaactgtttg
gattacatggaactataagacagagaattcgggcagcatcggcggcaccaacaaaaaagg
cacagacgacacaggaaagttagacaacttcaacaacagccagatgtggaaatcgctcac
agagagcaaggccatggacgtgttgtgacttggacgggccctggatttgccagggtaaag
gatggagctggtctagtgttcaccattgataacataccgtattctatggattatgacatc
attattcgctatgaaacagagtccacagaagattgggaagccataattagtattacctct
cactcattgcccatgagtcttcgctgtggtaatattctttcttcagaacagacgtacata
gtgaaactcctacatgatcaaaggtacattaagatgccacgacctttctgctttgaatca
aataatcggtacatggtggcaatacggtttcagcgttttggtgttgcggaacggtatttt
aatgctttcatactgatagactcgttggttctctttccaaagtacacggaactgcctggg
ttccacggaaatgaccccctcgccattcatcaccgggaagaaatggaacgttacatgtgt
gtcgaatctttcatgatggtccccatgccagaactggcagaaatgtgcatcaagctattg
tgtagtatctcagctattttacatgatggggcagtaccttgcaattgtgacccccagggc
tcttacagtgcagtatgtgagaagataggagggcagtgtcaatgtaaacctaatgtgatt
ggccatcgctgtgaccagtgtgcacctggaacatatggctttggaccttatggctgcagc
ccttgcaactgcaactcgcagggatcagagagcttcttctgtgatcccgtaacgggtcaa
tgtccttgtaaatcacaagtgaccggacgtcagtgtggtagctgtcatcctggccactgg
ggtttcccacactgcagacagtgccactgtaatggacactcagaagagtgcgaccctcag
actggagcctgcattgcgtgtagagaccacacaacgggtcattattgtgacaggtgtttg
gatggtttttatggaaacccaatcttggaatatggagagcactgccgtccttgtccatgc
ccaggcaacccaggatcagatcattttaatggcatatcctgctctcttgatggaacatct
agccagatcatatgtaactgctttccaggatattcaggtccacgttgtgacaagtgtgcc
cctggctattttggaaatccagaagaacatggaggtgaatgtcacccttgccattgcagt
ggcaatattgatacaagtgaccctggcgcatgtgatgcacataccggcaagtgtctgatg
tgcctctataatacccatggaccatcttgttcagagtgcaagccaggtttttatggcaac
gcattagcacatgactgcagatgttgtacctgtaacagtgccggtacattacggacgcaa
tgcacaggagatatgtgccactgtgatggcacgactggaatgtgccaatgcaggccaaat
gttgttggaaaaaattgtgatctgtgtgcccctaatcactggaactttggaatacccgaa
ggctgcgaaccttgtggctgccatccgttaaactcttttaggagtgactgcaacatgttt
acaggacaatgtcactgcttaccaggatttggaggtcgcacttgctttgactgtgaagca
aactattggggtgatcccaacataaaatgcagagcatgtgactgtgaccctcttgggtct
tccactcctcagtgtgatcgtcacactggaaaatgcatttgtgtggaaggagctacagga
cagaaatgtaatcagtgtgaccgcggatttactgggcattttcccaagtgtatacgttgc
caccactgctttcaacaatgggagagcatagtgaatcatctatatgaggagatcaggaga
attgagcaaagaattaagcatatcgagaacactggggtaccctctgataccctagacaga
cgcatccaagaacttcaggaaaagcttgtccaaattcagaaccttctcaaggacagatct
acagaaatgattttccaaattgtcagtgagtccacaaataatttaaggatggaaatttca
caaattgatggacaacttctacaagtatcagattctctcaacagtaccagacaccaggat
gaacagttacagaatagattacacaagatggagactgaaacacgggacttaaacaacact
gtgaaaattctccatgacaagctgcagaacctcctcacatctggaactagtgagcaattt
gaaaacataaaaatgtactattatgagtcgttggaagcagaaagaagagcaaatgaatcg
gttttcggagataggagccctgtagcagagtctcaagaaacacgaattaaaaccgaggat
ttgttgaacaggaagaagaatgaatttcacagaacaatgacagctcatactaaaacactt
aaagagcttcagaacaaaacaaaggatctagacagcaatcttaaccacctgaatgaaaag
gtttgtggcagtatgaataaagagaagaatggaaagcataactgcaccactgacccttgc
ggaggtgctggctgtcgtgatgaattcaacaagagaaagtgcggaggagaaacttgcaat
ggggctgtaagctcagctttcaaagcactgaaggtggtgcagaacaaatcgagtgaaatt
gaagccattgcagatcgactgagtgatgttgaaaaggagcttcgcaatattaaaatgatt
gcagaagaagccaaaagtcaaacacaaaacactttgaaaaaagcacagaccaccaaagat
gaaatagatgaatccaaccagaaactaaaagagttccttaagaagattaaagatttctta
agcgaggaaggagcagaccccaaaaatattgacttggtatcccgattagttctcaatatt
tcacttcctgtgacttctggcaatctgtctgagatcataagacagatcagagaaagcatc
agcagcctcggaaacgttgaccagattctcaatagcactgccaagcatctcaaacaggct
caggatctgctgaatgaagccaatgatgcaaagtccagagctgaggacattaaggaagta
gtaaatgacacaaaacttgctttggaaacagcacaaatgtctatagatgaagcaaatcga
actctgaagaaagcacagaaaaacataaaaggcatcaacaagacaactgagatgatacaa
agcaaatttcagaacattaatgcaaagcaaatggacgcaatgaagcgactgtcagaactg
gcaaagaatgtgggcttgctacagaacaatacagacctcaaccgtttgaaggctagcaaa
gccaacatctcagccgaaaatgcaatgatggaagtgaacagcctaaatgaggatttccaa
gagattaaccagaagttcaaagagttaaacaaaaccattggaggaactgaagggatgggt
gacttgtccagcagggtgaacaaagttaaagaagaagcagaagagctgctcagagcagcc
aacgacaagatcaaaaatgtagaagacctggaaagaaagttcaagatgaatgaagagaaa
atgcaacagcaggccaaaatattaaaagagctggaaaccacaattatcaacatccgggaa
atgatccacaacaatatgactcattatagctcttgtacgagttaa
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integrated database retrieval system
