Polypterus senegalus (gray bichir): 120541335
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Entry
120541335 CDS
T08668
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120541335 (spata5l1)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120541335 (spata5l1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120541335 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_14
Rad17
AAA_33
AAA_7
TIP49
RNA_helicase
bpMoxR
ABC_tran
DUF815
AAA_11
Mg_chelatase
NTPase_1
AAA_19
TsaE
NACHT
nSTAND3
IstB_IS21
Viral_helicase1
CDC48_N
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
120541335
NCBI-ProteinID:
XP_039628791
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Position
12:complement(89716011..89742242)
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AA seq
754 aa
AA seq
DB search
MECMDLKLLPLDPKDQGSQRCRLGPKAMAALGLDIGSAVRISLPRGECVCTAWPRGDLAD
GFLQFDSKCISEELAGKTFKNLSVNLKQIKKAVFTKLHHVKVVVVVKTVEFKRSTPSTLL
HEIVKDMLHNVYVSANHVISLASVETPVELVKVQKLSPSTDDVGLITRKTTVKVTEVRTT
ESYKYQLENSWKIPLGGVDDVFASLVEILSLPFQYPRTLQRLGLACPKGVLLIGPPGVGK
TLLVKSVTREVGAHLLTVSGPVILGSRPGESEENLRGVFKRAKDLSEEGPCVLFIDELDS
LCPRRTESTNAPENRLVAQLLTLMDGMGSAGSFVVMAATNRPDSLDPALRRPGRFDREVI
IGVPTLKQRVSILEVLSSQMPVCGDVDLISLAEMTTGFVGADLTALCREAALQAILHSSQ
VTGSPEINMKHFHEALKRVYPSCLRSSVGLTDLKPITWEHIGGLEDVKLKLKQSIEWPMK
FPEAFIRFGLTRPKGVLLYGPPGCAKTTLVKAAASSSHCSFLSVSGADLYSPYVGDSEKT
LAQVFQQARACAPSVLFLDEIDSILGSRADVKAGRGVQDRVLSVILNELDGIGLKVTERR
KTGCKTIQQESLTEKPEGNQQIEYQEVCNKDVLVVAATNRPDLLDDALLRPGRLDKIIYV
PPPDREARLAILRICTEKMPLDAEVCLERLADETGFFSGADLENLCKEAALLTLQEEGLD
ASFIKHGFFLKALQTIKPSLTVQQVEFYRTLLKR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtatggatctaaaactgctgcctttagatccaaaggaccagggctcgcagcgt
tgcaggctggggcctaaagcgatggctgcccttggactggatattggcagtgcagtaaga
atttcactgcctcgaggtgaatgcgtttgcactgcttggccaagaggtgacctggcagat
ggcttcttacagttcgactccaagtgcatatctgaagagcttgcagggaagactttcaag
aatctgagtgtaaaccttaaacagataaagaaagcagtttttactaagctgcatcatgtc
aaagtcgtcgttgttgttaaaacagtggagttcaagcgatcaacgccatccaccttactt
catgagattgtaaaggacatgcttcataacgtttatgtttcggcaaaccacgtcatatct
ttagcttctgtggagactcctgttgagctggtcaaagtacagaagctgagtcccagtaca
gatgatgttggccttatcaccagaaaaacgaccgtcaaagtcaccgaagttaggaccaca
gagagctacaaatatcagttagagaattcttggaagattcctctgggaggagtggatgat
gtgtttgcctctttggtggaaattctaagcctcccctttcaatacccaagaacgttacaa
aggttgggtctggcctgtcctaagggggtattgcttatcggaccaccgggcgtggggaaa
actctactggtcaaaagtgttactagggaggtcggggctcatttgttaacagtaagtggg
cctgtaatccttgggtcaaggccaggagagagtgaggaaaacttgagaggagtttttaaa
cgggcaaaggatttatctgaggagggaccctgcgtcctcttcattgatgaacttgattct
ctatgccccagacgtacagagtctacgaacgcacctgaaaaccgcctcgttgcacagctt
ctgacactgatggatggcatgggcagcgccgggagctttgttgtcatggcagcaacaaat
cgccctgattctttagacccggctttgagacgaccaggacgctttgacagggaggttatt
attggagttcctacgcttaaacagcgagtttccattttagaagtgttaagttcacagatg
cccgtttgcggagatgttgacctgatttcattagcagaaatgactactggattcgtgggc
gccgacctcacagcactctgcagagaagctgcattacaggcaatactgcacagtagccag
gttacaggcagtcctgaaatcaatatgaagcatttccatgaagcccttaaaagagtttac
ccatcatgcctgagaagtagtgttggtttaactgaccttaagcctatcacctgggaacac
attgggggccttgaagatgtgaaattaaaactgaaacagagtattgaatggcctatgaag
ttcccggaagcttttataagatttgggctcacacggcctaaaggagtcctcctctatgga
ccaccaggttgtgctaagacgacgctggtaaaagctgcagccagcagctctcattgttcc
ttcctgtccgttagtggggctgacctgtactccccttacgttggggactccgagaagacc
ctggcacaggtgttccagcaagcaagggcctgtgctccgtcagttctcttccttgatgaa
atcgattcaattttggggtcccgggcagatgttaaagctggaagaggtgttcaagataga
gtgttgtccgttattcttaatgagcttgacggcattgggctaaaggtgacagaaagaaga
aaaacaggatgtaaaacaattcagcaggaaagtctaacagagaaaccggaaggtaaccag
cagattgagtaccaagaggtttgcaataaagatgtccttgttgtggcagcaaccaacaga
cctgatttactggatgatgccctcctgcgaccagggagactggataagatcatttacgtg
cccccacctgaccgagaggcaagacttgctatattgagaatctgcacagagaagatgcca
ttagatgctgaggtatgcttggaacgcttggcagatgagacaggattcttctctggtgca
gatcttgaaaatctttgcaaagaggcagctttacttaccttgcaagaggagggattggat
gcttctttcattaaacatggattcttcctgaaggcacttcaaacaataaagccgtcctta
acggttcagcaagtagaattttacaggacacttttaaaaagatga
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