Aquirufa nivalisilvae: HME7025_01101
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Entry
HME7025_01101 CDS
T05454
Symbol
dpo1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03030
DNA replication
psez03410
Base excision repair
psez03420
Nucleotide excision repair
psez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME7025_01101 (dpo1)
03410 Base excision repair
HME7025_01101 (dpo1)
03420 Nucleotide excision repair
HME7025_01101 (dpo1)
03440 Homologous recombination
HME7025_01101 (dpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psez03032
]
HME7025_01101 (dpo1)
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_01101 (dpo1)
Enzymes [BR:
psez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME7025_01101 (dpo1)
DNA replication proteins [BR:
psez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HME7025_01101 (dpo1)
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HME7025_01101 (dpo1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HME7025_01101 (dpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
RecR_HhH
KASH_CCD
Motif
Other DBs
NCBI-ProteinID:
AWL08964
UniProt:
A0A2S2DU77
LinkDB
All DBs
Position
complement(1253715..1256564)
Genome browser
AA seq
949 aa
AA seq
DB search
MKKLFLFDAMALIYRAHFAFAKTPRISSKGINTSAVFGFTNTILEVIQKEKPDYLGVAFD
TSAPTFRHIEYTPYKAQRQVQPEDITIAIPYVKRLVEAMDIPLLILDGYEADDIIGTIAK
KAVKANPEIVVYMMTPDKDYGQLVEERIKMYKPAFMGKGVEILGPEEVCARWNIQHVDQV
IDMLGLMGDAVDNIPGIPGVGEKTAQKLIEQFGSLENLLENTDQLKGKLQENLVNFKEQG
ILSKHLARILCEVPLEYEEEKLLYTPPNKALLEPLLDELEFRTLRKRILGEEAAAEPIAP
KAKASPKVVANQMDMFGSPAPAAPISSISKEENMEEEEASSYQSFNTLENTPHQYHLVQG
EAAIKGLISYLARQTSFCFDTETTNINAIDAELVGMSFAYRKGEAFYIPFPENSAECQQQ
LDLFKELFANEQIQKIAQNIKYDMSVLANYGIEIKGETYDTMLAHYLIEPEKRHNMDAMS
MSYLHYEPMSIEKLIGKKGAKQGNMRDVDLDLVKEYAAEDADITWQIKPHLDQLMASNDK
TIQLFKEVEMPLARVLSTVEREGVLLDIPFLKDMSNTLEKDSHEVQKQIFELAGESFNIA
SPKQLGEVLFEKLRLDPKAKKTKTGQYMTGEEILSKLEGEHKIASLILDFRELQKLKSTY
VDALPQLISPKTGRIHTSFMQAVTATGRLSSKDPNLQNIPIRTVRGREIRKAFIPRNEDY
QILSADYSQIELRIMAAFSQDESMCEAFNKGLDVHKATAAKVFQVPLEEVSSDMRRKAKT
VNFGIIYGVSAFGLAAQIGISRTEAKEIIDQYFIEFPKVKSYMDQSIAKARDYGYVETVL
GRRRYLKDILSPNMNERGFAERNAINAPIQGSAADMIKVAMIQIQDFLWKENLKSKMILT
VHDELVFDAHVDEIGYLREKIDKIMCSALDLGVVIETGIGVGANWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattattcctttttgatgcaatggccttgatttatcgtgcccattttgcattt
gcaaaaacacccagaatctcatcaaaaggaattaataccagtgccgtcttcggttttacc
aataccattttggaagtcattcaaaaggaaaaacctgactatttaggtgtagcctttgac
acctctgctcctacttttaggcacatcgaatacacaccttataaggcacagcgacaagtt
cagccagaagatattaccatagctattccctacgtgaaacgtctagtggaagccatggat
attccattacttatcctagatggttatgaagccgatgatatcattggaaccatcgctaaa
aaagccgtaaaagcgaatcccgagatcgttgtttatatgatgactccagataaggattat
gggcaattggtggaagaaagaattaaaatgtacaagcctgcctttatgggtaagggtgtt
gaaatattaggtccagaagaagtatgtgcgcgatggaatatccaacatgtagaccaagtg
attgatatgttaggcttgatgggtgatgctgtcgacaatattcctggtattccgggagtt
ggcgaaaagactgctcaaaagctgattgaacagtttggatcattagaaaatcttttagaa
aatacagatcaactcaaaggaaagcttcaggaaaacctagtaaattttaaagaacagggc
atattatccaagcatttagctcgaattttatgtgaagttccattagaatacgaggaagaa
aagttgctgtatactcccccaaacaaggctcttttagaacctctcttggacgagttggaa
ttccgtaccttgagaaaaagaattttaggggaagaagctgctgctgaaccaatagcgcct
aaagctaaggctagccctaaagtagtggccaatcaaatggacatgtttggtagtcctgcc
ccagctgcacctatctcttcaatttctaaagaagaaaatatggaagaggaagaagcttct
agctatcaatctttcaacacacttgaaaatacccctcaccaataccacttagttcaaggt
gaagccgccatcaagggattgatttcatatttggccagacagacatctttttgttttgat
acagaaactactaacatcaatgccattgatgcagaattggtaggaatgtcatttgcttat
cgaaaaggcgaagctttctacattccttttcctgaaaattcagcagaatgccaacagcaa
ttagatttgttcaaggagctttttgccaatgaacaaattcagaaaattgctcaaaatatc
aaatatgatatgagtgtattggccaattatgggatagaaatcaaaggagaaacctacgat
accatgttggctcactacctgattgagcctgaaaaacgccataatatggacgcaatgtcc
atgagttatttgcattatgagcctatgtccattgagaaattaattggcaaaaaaggtgcc
aaacaaggcaatatgcgggatgtggatttagatttggtaaaagaatatgcggcggaagat
gctgacatcacttggcaaataaaacctcatttggaccagttaatggcgagtaatgataaa
actattcaacttttcaaagaagttgaaatgcctttggccagggttttatctaccgtagaa
agagaaggagttttattggatattcctttcttaaaggatatgtcaaataccttggaaaaa
gactcacatgaggttcaaaaacagatttttgaattagcaggcgaatcatttaatatagct
tctcccaaacaattaggtgaagtattgtttgaaaaacttcgcttagaccctaaagctaaa
aagaccaagacaggtcaatatatgactggggaagaaatcctttccaaattagagggtgaa
cacaaaatcgcatcgttgatcttggattttagggaattacaaaagctcaaatctacttat
gtggatgccctacctcaattgatttctccgaagacaggtcgtattcatacctctttcatg
caggccgtaacagctacaggtcgtttatcttccaaggatcctaacttacaaaatattcca
atccgaacagttcgtggaagagaaattagaaaggcctttattccaagaaacgaagactac
caaatactttcagcggattactctcaaatagaattgcgcatcatggcagccttttcacaa
gatgaatccatgtgcgaggcctttaacaaaggcttagatgttcacaaagccacggcagca
aaagtttttcaagttcctttagaagaggtcagctcagatatgagacgaaaagccaaaacg
gtcaactttggaattatttatggggtatcagcctttggcttagctgcacaaattggaatt
tccagaacagaggctaaagaaatcatcgatcaatacttcattgaattcccgaaagtgaaa
tcatatatggatcaaagtatagccaaagcaagagattatggctacgtagaaaccgtatta
ggaagaagacgctatttaaaagacattctatcacccaatatgaatgagaggggttttgca
gagcgaaatgccatcaatgcacccattcaaggatctgctgctgacatgatcaaagtggcc
atgattcagattcaagatttcttatggaaagaaaatctcaagtcgaaaatgatcttgacg
gtacatgacgaacttgtatttgatgctcatgtggatgaaattggctaccttcgtgaaaag
attgataaaatcatgtgttctgccctcgatttaggggttgtcattgaaacgggtattggt
gttggtgcaaattggttggaggcccattaa
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