Pseudovibrio sp. FO-BEG1: PSE_1055
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Entry
PSE_1055 CDS
T01669
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf00300
Lysine biosynthesis
psf01100
Metabolic pathways
psf01120
Microbial metabolism in diverse environments
psf01230
Biosynthesis of amino acids
Module
psf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSE_1055 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psf01002
]
PSE_1055 (dapE)
Enzymes [BR:
psf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PSE_1055 (dapE)
Peptidases and inhibitors [BR:
psf01002
]
Metallo peptidases
Family M20
PSE_1055 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AEV35567
UniProt:
G8PSE1
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All DBs
Position
1105745..1106914
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AA seq
389 aa
AA seq
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MTDTLSPAVQICRDLIRCPSVTPAEGGALSTLENLLAGAGFDVSRVTFTDEDTPDVENLF
ATVGTGKPHFVFAGHTDVVPVGDEAAWTHGPFDGTIADGMLHGRGTADMKGGVAAFAAAA
LDYVKAHPDGIPGQISFLITGDEEGPAINGTVKLLEWAKEQGHEFDACIVGEPTNPDALG
DAIKVGRRGSLTGTIKVNGTQGHVAYQHLADNPVPNMLKLLSAVSEVELDKGNERFQPSN
LEITTVDVGNTATNVIPAHVMAKFNIRFNDQWSVKSLSEHVTKLLSDAAPEGLDWSIEYA
KEATDSFLTHDEALIQTLSNSIKTVTGRTPELSTGGGTSDARFIKNYCAVVEFGLVGQTM
HKVDEHVAVADIEQLADIYLRFLQDYFQA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacgctttctcctgcggtacagatctgccgcgaccttatccgctgtccaagt
gtcaccccagctgaaggcggtgctctttccacgctcgaaaacctgcttgcaggcgctggt
tttgacgtttcccgtgtcaccttcaccgatgaagatacaccagacgtcgagaacctgttc
gctaccgtcggcacaggcaaaccgcatttcgtttttgcgggacacactgatgttgtgcca
gtgggcgacgaagccgcatggacccatggcccgttcgacggcaccatcgcagatggcatg
ctgcacggacgtggaacggcagatatgaaaggcggtgttgctgcgtttgcagcagccgct
ctggactatgtgaaagcgcatccagacggaattccgggccagatttccttcctcatcacc
ggtgatgaagaaggccctgccatcaacggcactgtaaaactgctggagtgggcaaaagag
caggggcatgagtttgatgcctgtatcgtgggcgaaccaaccaacccggatgctctgggt
gatgccatcaaagtgggccgccgcggctccctgaccggcacaatcaaggtcaacggcaca
cagggccacgttgcctatcagcatctggcagacaaccctgtaccaaacatgctcaaactg
ctgagtgcagtctctgaagtggaactggacaaaggcaacgagcgcttccagccatccaat
ctggaaatcaccaccgtcgacgttggcaacacagccaccaacgttattccagcgcatgta
atggcgaagttcaacattcgctttaacgatcagtggtccgtcaaatctctgagcgagcac
gtcaccaagcttctgagcgacgcagcacctgaggggcttgattggagcattgaatacgcc
aaggaagcaacagacagcttcctgacccatgatgaagcgctgatccagaccctgtccaac
tccatcaagacagtcacaggccgtacaccagagctgtctactggtggcggtacctcagat
gcacgcttcatcaagaattactgtgctgtagttgagttcggcctcgtcggtcagaccatg
cacaaggtcgatgagcacgtcgcagtggcagatatcgagcaactcgccgatatctacctc
cgcttcctgcaagactactttcaggcttga
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