Pseudomonas shahriarae: HU773_021985
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Entry
HU773_021985 CDS
T07642
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshh03009
]
HU773_021985 (rimO)
Enzymes [BR:
pshh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU773_021985 (rimO)
Ribosome biogenesis [BR:
pshh03009
]
Prokaryotic type
ribosomal protein modification factors
HU773_021985 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXH92007
LinkDB
All DBs
Position
4934677..4936005
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AA seq
442 aa
AA seq
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MAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAE
SLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVPPRQD
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRL
VKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPDLIIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQERW
ERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKP
GDKVWCTVTDADEYDLWAQKRD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atcgcaaaagccaacccaaaggttggctttgtttccctgggttgcccgaaggctctggtc
gactccgagcgcatcctcacgcaactgcgcatggaaggctacgacgttgtgtccacctac
caggacgctgacgtggtggtggtcaacacctgtggcttcattgactcggccaaggcagag
tccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatcgtcaccggctgc
atgggcgtggaagaaggcaatatccgcaacgtgcacccaagtgtgctggcggtgaccggt
ccgcagcagtacgagcaggtggtcaacgccgtgcacgatgtggtgccgccgcgccaggac
cacaacccgctgatcgacctggtgccaccccagggcatcaagctgaccccgcgtcactat
gcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtcagccgcccggtgggcgatgtactggacgaggcccagcgtctg
gtcaagtccggggtcaaagagctgctggtgatctcccaggacaccagtgcctacggcgtc
gacgtgaagtaccgcaccggtttctggaacggcgcgccggtgaaaacccgcatgaccgaa
ctgtgcgaagccctgagcagcctgggtgtgtgggtgcgcctgcactacgtgtacccgtac
ccgcacgtcgacgaactgatcccgttgatggccgccggcaagatcctgccgtacctggac
atcccgttccagcacgccagccccaaagtgctcaaggccatgaaacgcccggccttcgaa
gacaagaccctggcgcggatcaagaactggcgcgagatctgcccggacctgatcatccgc
tcgacctttatcgtgggcttccccggcgaaaccgaagaagacttccagtacctgctggac
tggctgaccgaagcccaactggaccgcgtcggctgcttccagtactcgccggtggaaggt
gccccggccaacctgctggacctggcggtggtgccggatgacgtcaagcaggagcgttgg
gagcgtttcatggcccatcaacaagccatcagctcggcccgcctgcaactgcgcatcggc
aaggaaatcgaagtgctgatcgacgaagtggacgagcaaggcgcggtcggccgctgcttc
ttcgacgcgccggaaatcgacggcaatgtatttatcgacgatgccagcggcctcaagccc
ggcgacaaggtctggtgcacggtcaccgacgccgacgagtacgacctctgggcgcaaaaa
cgcgactaa
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