Plesiomonas shigelloides: SAMEA2665130_2882
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Entry
SAMEA2665130_2882 CDS
T04378
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00540
Lipopolysaccharide biosynthesis
pshi01100
Metabolic pathways
pshi01250
Biosynthesis of nucleotide sugars
Module
pshi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA2665130_2882 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
SAMEA2665130_2882 (hldD)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SAMEA2665130_2882 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
Core region
SAMEA2665130_2882 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
ThiF
Motif
Other DBs
NCBI-ProteinID:
SBT62305
UniProt:
V5TDW0
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All DBs
Position
1:3170102..3171049
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AA seq
315 aa
AA seq
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MIIVTGGAGMIGSNIIKALNDMGRSDILVVDNLKDGTKFVNLVDLDIADYMDKEDFITQI
MAGDDFGDIDAVFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDRQIPFLYASSAATY
GGRDHDFIEERPYEGALNVYGYSKQLFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPR
EGHKGSMASVAFHLNTQINKGENPKLFAGSENFKRDFVYVGDVAAMNLWFWEAGVSGIFN
CGTGNAESFQAVADAVTAYHQKGQVEYIPFPEHLKGRYQAFTQADLTKVRAAGYNKPFKT
VTEGVAEYMAWLNKR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggcatgatcggcagcaacatcattaaagcgttgaac
gacatgggacgcagcgacattctggtggtcgataacctgaaagacggcactaaattcgtc
aatctggttgatcttgatatcgctgattatatggataaagaggacttcattacccagatt
atggccggcgatgacttcggcgatatcgatgcggtattccacgaaggcgcttgctctgcc
accacggaatgggacggcaaatatgtcatgctcaacaactatgagtattccaaagagctg
ctgcattactgtctggatcgccagatcccattcctgtatgcctcttcggcagccacttac
ggcggccgtgaccacgactttatcgaagaacgcccttatgaaggcgcgttgaacgtctac
ggctactccaagcagctgttcgacaactatgtgcgtcgtttgtggcaagatgccgaagaa
catggcgaaacactgtcgcaaatcaccggtttccgttacttcaacgtttacggaccacgt
gaaggccacaaaggcagcatggccagcgtcgcgttccacctcaacactcagatcaacaag
ggtgaaaatcctaagctgttcgccggtagcgaaaacttcaagcgtgacttcgtgtatgtc
ggtgatgtcgccgccatgaacctgtggttctgggaagccggtgtgtctggcattttcaac
tgcggtaccggcaatgcggaatctttccaagcggttgccgatgcagtcaccgcctaccat
caaaaaggtcaggtggaatacatcccattccctgaacatttaaagggccgttatcaagcc
tttacccaagccgacttgaccaaagtacgcgcggctggctataacaagccattcaaaacc
gtgaccgaaggggtagcggaatatatggcgtggctgaataagcgttaa
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