Plesiomonas shigelloides: SAMEA2665130_3020
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Entry
SAMEA2665130_3020 CDS
T04378
Symbol
hemB
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00860
Porphyrin metabolism
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01240
Biosynthesis of cofactors
Module
pshi_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pshi_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SAMEA2665130_3020 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshi04147
]
SAMEA2665130_3020 (hemB)
Enzymes [BR:
pshi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SAMEA2665130_3020 (hemB)
Exosome [BR:
pshi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SAMEA2665130_3020 (hemB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
SBT62430
LinkDB
All DBs
Position
1:complement(3327594..3328610)
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AA seq
338 aa
AA seq
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MSINIPGSFPGRRLRRVRYQDFSRRLVAEHRLSVDDLIYPVFVLEGENRREAVSSMPGIE
RLSLDLLLEEAAELVALGIPAIALFPVIGQEKKSLLAEEAYNPQGLVQETVRALKARHPE
LGIITDVALDPYTVHGQDGIIDEQGYVLNDITTEVLVKQALAQAEAGVDVIAPSDMMDGR
IGAIREALEANGFVNTQIMAYSAKYASCYYGPFRDAVGSSSNLKGGNKKTYQMDPANSNE
ALQEVAQDLQEGADMVMVKPGMPYLDVVRRVKDQFGVPTFAYQVSGEYAMHMAAIQNGWL
KERDSIMESLLCFKRAGADGILTYFAKQAAQWLRDEQR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaatattcccggttcattcccgggtcgtcgtctgcgccgggtgcgctatcaa
gattttagccgtcgtctggtggccgaacatcgtttgagcgtcgatgatctgatttatccg
gtgtttgttctggaaggggaaaaccgccgtgaagcggtatcgtccatgccggggattgag
cgtttatcgctggatttattgctggaagaggccgcggagctggtggcgttggggatcccg
gcgattgccctgtttccggtgatcgggcaggagaaaaaatccctgctggcggaagaagcc
tataacccacaagggctggtacaagaaacagtacgggcgctgaaagcgcgtcaccccgag
cttggcatcatcaccgatgtggcattagacccatataccgtacatggtcaggatggcatc
atcgatgagcaaggttacgtgctcaatgacatcaccaccgaagtgctggtgaaacaagct
ctggcgcaagcggaggccggagttgatgtgattgcgccaagtgacatgatggacggccgc
atcggcgcgattcgtgaggcgctggaagccaatggatttgtgaacacccaaatcatggct
tattccgccaaatatgcttcttgctattacggcccgttccgcgatgcggttggctcatcc
agtaacctcaaaggcggtaacaagaagacttaccagatggatccggccaacagcaatgaa
gcgttgcaggaagtggcgcaagatctgcaagaaggcgcggatatggtgatggtgaaaccg
ggcatgccgtatctggatgtggtgcggcgggtcaaagatcagttcggagtgccaaccttt
gcctatcaggtttctggcgagtacgcgatgcacatggcggcaatccaaaacggctggctg
aaagagcgcgattccattatggaatccttgctgtgtttcaagcgggccggtgccgatggc
attttgacctactttgctaagcaagccgcccagtggctgcgtgacgagcagcgctaa
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