Pseudooceanicola spongiae: F3W81_18200
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Entry
F3W81_18200 CDS
T06866
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshq03009
]
F3W81_18200 (rimO)
Enzymes [BR:
pshq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F3W81_18200 (rimO)
Ribosome biogenesis [BR:
pshq03009
]
Prokaryotic type
ribosomal protein modification factors
F3W81_18200 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
QOL82580
UniProt:
A0A7L9WU19
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All DBs
Position
complement(3863251..3864633)
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AA seq
460 aa
AA seq
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MSQNPPNLRPDLAPAPRLGDTSRRAGQPSLGMVSLGCPKALVDSERILTRLRAEGYAISP
DYAGADAVIVNTCGFLDSAKAESLAAIGEALAENGRVIVTGCLGAEPEYITGAHPKVLAV
TGPHQYEQVLDAVHKAVPPSPDPFVDLLPASGVSLTPRHYSYLKISEGCNHKCKFCIIPD
MRGRLQSRPAHAVVREAEKLVQAGVKELLVISQDTSAYGVDIKHMTERDHRAHITDLARD
LGALGAWVRLHYVYPYPHVRDLIPLMADPASGLLPYLDIPFQHAHPDVLKRMARPAASAR
TLDEIAAWRATCPDITLRSTFIVGYPGETEAEFQYLLDWMDEAQLDRVGCFQYENVAGAR
SNDLPDHVPDEVKQERWDRFMEKAQAISEAKLQAKVGKTLQVIVDEVDEDAATCRTWADA
PEIDGNLFIDEGFEHLSPGDIVTVEVDEAGEYDLWGRLTN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaacccgccaaacctccgccccgatctcgcccccgctccgcggctgggcgat
acctcccgtcgcgcaggccagccgtctctcggtatggtcagcctcgggtgtcccaaagcc
cttgtcgacagcgagcggattttgacccgcctgcgcgctgagggctatgccatcagcccc
gattacgcgggcgccgatgcggtgatcgtgaacacctgcggcttcctcgactccgccaag
gcggaaagcctcgcggccatcggcgaagcgctggccgaaaacggccgcgtcatcgtcacc
ggctgcctcggggccgagcctgaatatatcaccggcgcgcacccgaaagtcctcgccgtc
accgggccgcaccaatacgaacaggtgctcgacgcggtgcacaaggccgtgccgcccagc
cccgatcccttcgtcgacctgctgccggcgtccggagtctcgctgacaccgcgccactac
agctacctcaagatttccgagggctgtaaccacaagtgcaagttctgcatcatccccgac
atgcgcggccgcctgcaatcacgccccgcccatgctgtcgtgcgcgaggctgaaaagctg
gtgcaagcgggcgtcaaggaactgctggtgatctcacaggacacctcggcctacggcgtc
gacatcaagcacatgacggaacgcgaccatcgcgcccatatcaccgacctcgcccgcgac
ctcggcgcgcttggcgcctgggtccggctgcactacgtctacccctacccgcatgtgcgc
gacctgatcccgctgatggccgatcccgcctcgggcctgctgccctatctcgacatcccg
tttcagcacgcccacccggatgtgctcaaacgcatggcccgccccgcagcctccgcccgc
acgctggatgaaatcgccgcctggcgcgccacctgccccgacatcaccctgcgctcgacc
ttcatcgtcggctaccccggtgagacagaggcggagttccagtacctgctcgactggatg
gacgaagcccagctcgaccgcgtcggctgcttccaatacgaaaacgtcgcaggcgcccgc
tccaacgacctgcccgaccacgtccccgacgaagtcaaacaggagcgctgggaccgcttc
atggaaaaggcgcaagccatctccgaggcgaaactccaggccaaagtcggcaagaccctg
caggtcatcgtggacgaggtcgacgaagacgccgccacctgccgcacctgggccgatgcc
ccggaaatcgacggcaacctcttcatcgacgaaggcttcgaacacctctcccccggcgac
atcgtcacggtcgaggtcgacgaggccggcgaatacgacctttggggccgcctcaccaac
taa
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