Pseudomonas siliginis: NF676_21305
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Entry
NF676_21305 CDS
T08569
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
psii
Pseudomonas siliginis
Pathway
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_21305
Enzymes [BR:
psii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NF676_21305
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
UST78674
LinkDB
All DBs
Position
4647218..4649269
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQKSRELQHSNSRWLTDLILGQE
RTFTTQLVGRGPYSEYYGDLSITLDTATYGEGFIVSSVIIFISGVLRALALGLVLYLVYH
WLLTKPLSRIIEHLTEINPDRPSEHKIPQIKGHEKNELGLWINTANQLLESIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAP
FALDDQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLRDALIRDQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACKQLREWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRL
PPRSLELEVTETGLMEDITTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEGCHEGQGYHYS
KPLPARELGIYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctccgggtcgtgctcctgtcg
gcattgatcgtaggcgtagtcttgagctgcgcgcagattgtcttcgatgcctacaagacc
cgtcaggcggttgccggcgacgccgagcgcatcctcgacatgttccgcgatccatcgacc
caggccgtgtacagcctggaccgggaaatgggcatgcaggtgatcgaagggctgttccag
gacgacgccgtgcgtcaggcctccatcggccaccccaacgaagccatgctcgcgcagaaa
tcccgcgaactgcagcattccaatagccgttggctgaccgacctgattctcggccaggaa
cgcaccttcaccacgcaactggtcggccgcggcccctacagcgaatactacggcgacctg
agcatcaccctcgacaccgccacctatggcgaagggtttatcgtcagctcagtgatcatt
ttcatttccggcgtactgcgtgcgctggcgttggggctggtgctgtatctggtctatcac
tggctgctgaccaaaccgctgtcacgaatcatcgagcacctcaccgagatcaacccggat
cgtcccagcgagcacaagattccgcagatcaagggccacgaaaagaacgaactgggcctg
tggatcaacactgccaaccagttgctcgagtccatcgaacgcaacacccacctgcgccac
gaagcggaaaacagcctgctgcgcatggcccagtacgacttccttaccggtctgccgaac
cgccagcaattgcagcagcaactggacaagattctcgtcgatgccggcaaattgcagcgc
cgcgtcgcggtgttgtgcgtcggcctggatgacttcaagggcatcaacgagcaattcagc
taccagaccggcgaccaattgctgctggccctggccgatcgtctacgtgcccacagcggt
cgcctgggcgccctcgctcgcctgggcggcgatcagttcgcgctggtgcaggccgatatt
gaacagccttacgaggcagcggaactggcgcagagcattctcgatgacctcgaggcgccc
ttcgccctcgacgatcaggaaatccgcctgcgcgcgaccatcggcatcaccctgtttccg
gaggacggcgacagcaccgagaagttgttgcagaaagccgagcagaccatgaccctggcc
aagacccgctcgcgcaatcgctatcagttctatatcgccagcgtggacagcgagatgcgc
cgtcgtcgcgagctggaaaaagatttgcgcgatgcgctgatccgcgaccagttctacctc
gtctatcagccgcagatcagctatcgcgatcaccgcgtggttggcgtcgaagcgctgatt
cgctggcaacatccggaacacgggctggtgccgccggacctgttcatcccgctggccgaa
cagaacggcacgatcatcgccatcggcgagtgggtgctcgatcaggcctgcaagcaattg
cgcgagtggcacgatcagggtttcgtcgatctgcgcatggcggtcaatctgtccaccgtg
caactgcaccacgccgagctgccacgggtggtcaacaacctgctgcaaatgtaccgcctg
ccgccgcgcagtctggaactggaagtcaccgaaaccggcctgatggaagacatcaccacc
gccgcccagcatttgctcagcctgcgccgctccggtgcgctgatcgcgatcgacgacttc
ggcaccggctactcgtccctcagctatctgaaaagcctgccgctggacaagatcaagatc
gacaagagcttcgtgcaggacctgctcgatgacgacgatgacgcgaccatcgttcgggcg
atcattcaactgggcaagagcctgggcatgcaggtgattgccgagggcgtggaaaccgcc
gagcaggaaacctacatcatttccgagggttgccacgaaggtcagggctaccactacagc
aaaccgctgccggcgcgggagctgggtatttacctcaagcaggcgcaacgcagcaacgcg
gctattttataa
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