Pseudomonas siliginis: NF676_24950
Help
Entry
NF676_24950 CDS
T08569
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00260
Glycine, serine and threonine metabolism
psii01100
Metabolic pathways
Module
psii_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NF676_24950
Enzymes [BR:
psii01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NF676_24950
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NF676_24950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
Pyr_redox_2
GCV_T_C
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
GIDA
HI0933_like
Pyr_redox_3
Pyr_redox
FAD_binding_3
Thi4
AlaDh_PNT_C
Lycopene_cycl
NAD_binding_9
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
UST79354
LinkDB
All DBs
Position
complement(5419779..5422796)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSQTNRLSNGGRIDRNKVLSFTFNGQTYKGYEGDSLAAALIANGVDIIGRSFKYSRPRGI
FAAGSEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRESLDGKPAMEWVASVIAELKNTPDVLL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARSN
PRGALVEEARAKGIRILTGSAVIEVRGSKRVTAARVAAIDVKAHAVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPVWREDILGFVPGEAPQKRVCVGGINGVYALGDSLADGFEGGV
RAAAEAGFQTVEGVLPKALSRLEEPTLALFQVPHEKNSARAPKQFVDFQNDVTAGGIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLHAAVKRECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAARVLQWLELYHQTEWPDMKVYFTSVTDHWATMTLSGPNSRKL
LSAVTDIDLSNEAFPFMTWKEGLVGDVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRSKPFSWIGQRGM
NREDCVKDQRKQLVGLKPIDPTKWLPEGAQLVFNTKQAIPMTMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRMGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccaatcgcctgtccaacggtggacggatcgaccgcaacaaagtgctgagc
ttcaccttcaacggccagacctacaaaggctatgaaggcgactcgctggccgccgcactg
attgccaacggcgtcgatatcatcggccgcagcttcaagtattcgcgccctcgcggcatc
ttcgcggctggttccgaagagccgaacgcggtgctgcagatcggtgctaccgaagccacg
cagattcccaacgtgcgcgccacgcaacaggcgttgtatcagggcctggtcgccaccagc
accaacggctggccgagcgtcaacaacgacatgatggggattctcggcaaggtcggcggc
aagctgatgccgccgggtttctactacaaaactttcatgtacccgcaatcgttctggatg
acttacgagaagtacatccgcaaggctgccggcctcggccgttcgccgaccgagaacgat
ccggacacctacgactacatgaaccagcactgcgacgtgctgatcgtcggcgctggcccg
gccggtctcgccgctgccctggccgctgcgcgcagcggtgcccgcgtgattctggccgat
gagcaggaagagttcggcggcagcctgcttgattcccgcgaaagcctcgacggcaaaccg
gcgatggaatgggtcgccagtgtcatcgctgaattgaagaacaccccggacgtgctgctg
ttgccgcgcgccacggtcaacggttaccacgaccacaacttcctgaccattcacgaacgc
ctcaccgatcacctcggtgaccgcgcgccgatcggacaggtgcggcagcgcatccaccgt
gtccgcgccaagcgcgtggtgctggcgactggcgcccacgagcgtccgctggtgtacggc
aacaacgacgtgccgggcaacatgctagccggcgcggtgtcgacctacgtgcgtcgttat
ggcgtagcgccgggcaaaaaactggtgctgtcgaccaacaacgatcacgcctatcgcgtc
gctctggattggctcgatgccagtctgcaagtggtcgccatcgctgatgcccgcagcaat
ccgcgcggtgcattggtcgaagaagcgcgcgccaaaggcattcgcatcctcaccggcagc
gccgtcatcgaagtgcgtggcagcaagcgtgtgaccgctgcccgcgtcgccgcgattgac
gtaaaggcccacgccgtgaccagtccgggcgaatggctcgactgcgacctggtggccagc
tccggtggttacagcccggtggttcacctggcttcgcacctcggtggcaaaccggtctgg
cgcgaagacattctcggtttcgtaccgggcgaagcaccgcagaagcgcgtgtgcgtcggt
ggcatcaatggcgtctacgcgctcggcgattcgctggccgacggttttgaaggtggcgtg
cgcgctgctgccgaagccggtttccagaccgtcgaaggcgtgttgccgaaagccctgagc
cgtctcgaagagccgaccctggcgctgttccaggtgccgcacgagaagaactcggcgcgt
gcaccgaagcaattcgtcgacttccagaacgatgtcaccgccggtggtatcgaattggcg
acccgtgaaggtttcgagtcggtcgagcacgtcaaacgctacaccgcgctgggcttcggc
accgatcagggcaagctcggcaacgtcaacggtctggccattgccgcccgttcgctgaac
gtgaccatcccgcagatgggcaccaccatgttccgtccgaactacacgccggtgaccttc
ggcgccgtggccggtcgacactgcgggcacatcttcgaaccggtgcgctacaccgcgctg
catgcctggcatgtgaagaacggcgccgagtttgaagacgtcggtcagtggaagcgtccc
tggtacttcccgaaaaacggtgaagacctgcacgcggcggtcaagcgcgaatgcaaagcc
gtgcgcgacagcgttggcctgctcgatgcttcgaccctcggcaagatcgacattcaaggc
ccggatgcccgcgagtttctcaaccgcgtgtacaccaacgcctggaccaagctcgacgtg
ggcaaggctcgctatggtttgatgtgcaaagaagacggtatggtcttcgacgacggtgtg
acggcttgcctggccgacaaccatttcgtcatgaccaccacgaccggcggcgcggctcgc
gtgctgcaatggctggagctgtaccaccagaccgaatggccggatatgaaggtgtacttc
acttcggtcaccgaccactgggcgaccatgaccctgtccgggccgaacagccgcaagctg
ctcagcgccgtgaccgacattgatctgagcaacgaagcgttcccgttcatgacctggaaa
gaaggtctggtcggcgacgtgccggcgcgggtgttccgtatctcgttcaccggtgagctg
tcgtacgaagtcaacgtgcaggccgattatgcgatgggcgtgctggagaaaatcgtcgag
gccggcaagcagtacaacctgacgccgtacggcaccgaaaccatgcacgtgctgcgggcc
gagaagggtttcatcatcgtcggccaagacaccgacggctcgatgaccccggacgacctg
aacatgggctggtgtgtcggtcgcagcaaaccgttctcgtggatcggccagcgcggcatg
aaccgggaagattgcgtcaaggatcagcgcaaacaactggtgggcctcaagccgatcgat
ccgaccaaatggctgccggaaggtgcacaactggtgttcaacaccaaacaggcgatcccg
atgaccatggtcggccacgtgacctccagctacgcgcacaactccctcggttactcgttt
gccatgggtgtggtcaagggcggtctcaagcgcatgggcgagcgggtgttcgcacccctg
gccgatggcagcgtgatcgaggcggaaatcgtttcttcggtgttcttcgatccgaagggt
gatcggcagaacatctga
DBGET
integrated database retrieval system