Pseudomonas silesiensis: PMA3_08595
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Entry
PMA3_08595 CDS
T05412
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psil
Pseudomonas silesiensis
Pathway
psil00071
Fatty acid degradation
psil00280
Valine, leucine and isoleucine degradation
psil00310
Lysine degradation
psil00362
Benzoate degradation
psil00380
Tryptophan metabolism
psil00410
beta-Alanine metabolism
psil00640
Propanoate metabolism
psil00650
Butanoate metabolism
psil00907
Pinene, camphor and geraniol degradation
psil00930
Caprolactam degradation
psil01100
Metabolic pathways
psil01110
Biosynthesis of secondary metabolites
psil01120
Microbial metabolism in diverse environments
psil01200
Carbon metabolism
psil01212
Fatty acid metabolism
Module
psil_M00087
beta-Oxidation
psil_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PMA3_08595 (fadB)
00650 Butanoate metabolism
PMA3_08595 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PMA3_08595 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PMA3_08595 (fadB)
00310 Lysine degradation
PMA3_08595 (fadB)
00380 Tryptophan metabolism
PMA3_08595 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PMA3_08595 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PMA3_08595 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PMA3_08595 (fadB)
00930 Caprolactam degradation
PMA3_08595 (fadB)
Enzymes [BR:
psil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PMA3_08595 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PMA3_08595 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PMA3_08595 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PMA3_08595 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ANJ55213
UniProt:
A0A191YR13
LinkDB
All DBs
Position
1896435..1898582
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADNSIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMANTAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLLEAALNLVKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVSRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKNGKQ
KKVADPSVADVLKPIVFEQREVTDEDIVNWLMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaggcagataattcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgttggcgccgacatcaccgaatttgtcgagaacttcaagctg
cccgatgcagagcttgtggcaggcaacctcgaagccaacaggatcttcagcgatttcgaa
gacctgaatgtcccgactgtcgccgcgatcaacggcattgccctgggcggcggtctggaa
atgtgcctggcggcggactaccgcgtcatggccaacaccgccaagatcggtctgccggaa
gtcaagctgggcatctatccgggcttcggcggcactgtgcgcctgccgcgcatcatcggt
gccgacaacgccatcgagtggattgccgccggtaaggaaaaccgcgccgaagacgcactg
aaagtcggtgccgtcgacgccgtggtcgccccggagaaactgctggaagccgcactgaac
ctggtcaagggcgccatctccggcgaattcgattacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgagaccgccaaaggtttc
gtcgccggtcaagcgggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagccgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtgttg
ggcgccggcatcatggggggcggtatcgcttatcagtcggcctccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggcctggctgaagccgccaagctg
ctggtgagccgcgttgataaaggtcgcatgaccgcggcgaaaatggccgaagtactcaac
ggcattcgtccgaccctgtcctacggtgacttcggtcacgtcgacctggtcgtcgaagcg
gtcgtcgagaaccccaaggtcaagcaagccgtgttggctgaagtggaaggccaggtcaag
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccatcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgattgcccgggctttctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaaggtttc
ccggaccgcatgaaagacgaccgtcgttcggccgtcgacgcgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagaacggcaagcag
aagaaagtcgccgacccgtcggtggcggacgtgctcaagccgatcgtgttcgaacagcgt
gaagtcactgacgaagacatcgtcaactggctgatgatcccgctgtgcctggagaccgtg
cgctgcttggaagacggcatcgtcgagaccgctgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgcggcggtgcgctgcgctacatcgactcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcaaaactgcgtgaaatggccaaaaccggccaacggttcttcggttaa
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