Phocoena sinus (vaquita): 116744884
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Entry
116744884 CDS
T07759
Symbol
TNFRSF8
Name
(RefSeq) tumor necrosis factor receptor superfamily member 8 isoform X1
KO
K05145
tumor necrosis factor receptor superfamily member 8
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116744884 (TNFRSF8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
psiu04050
]
116744884 (TNFRSF8)
04090 CD molecules [BR:
psiu04090
]
116744884 (TNFRSF8)
Cytokine receptors [BR:
psiu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116744884 (TNFRSF8)
CD molecules [BR:
psiu04090
]
Proteins
116744884 (TNFRSF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
116744884
NCBI-ProteinID:
XP_032470868
Ensembl:
ENSPSNG00000012138
LinkDB
All DBs
Position
1:9438771..9504995
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AA seq
598 aa
AA seq
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MRALRAVSGLLLLGVLRALPQGRVSKDACGGDSSRYYNEAAGKCCYRCPEWRSLKELCPE
GPNDCRKQCDPDYYLDRNGRCTACVSCFGDDLVEKKPCSWNSTRVCECRTGMFCGTSVIN
SCARCLPHSVCPTGMVVKFQGTAQRNTVCELPSPGASPNCSASPQDCKAPASTVPQAKPT
LTSPASSDARTTVLGEGTPLAPEDASKITARSSSSVGRLSPDPGLTLQQPCPQGSVDCRK
QCDPDYYLDRDGRCTACVSCSGDHLVEKTPCMWNSSRVCECRPGMFCATSASNSCARCVI
RPICPPGMVTKVQGTAERDTTYEPPPPGTHSNCSTNAEDSGVPASPTPSLISLADSLTGK
ERGGDVTHVRGRASISTSTPISFSSTGKPTLVSGPVLFWVILTLVVVVSFGSFLLCHRRG
CRKWMGQKLHLCYPVQNFQPKLEPVDSRPGRNPTLIRRVSVAEPGLEEQGLMSSPAVETC
PNLESLQLLEANPASSPSTSMDLPEPRGTAEHTNNRIENIYIMKADTVIVGTVKAKVPEG
QGPVGPAGPEFEEDLEVDHAPHYPEQETEPLAGSCGDVMFSVEEEGKEDPLPTTASGK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccctccgcgctgtgtcgggactgttgctcctgggggtgctccgagccttacca
cagggtcgagtctccaaggatgcctgtggaggggactccagccgctactacaacgaggct
gccgggaagtgctgctaccgctgccccgagtggcgttccctgaaggagctgtgccctgag
gggcccaatgactgcaggaagcagtgtgatcccgactactacttggacagaaatggccgc
tgcacagcctgtgtgagctgttttggagacgacctcgtggagaagaagccatgctcatgg
aactctacccgcgtctgcgagtgccggactggcatgttctgtggcacatcagtcatcaac
tcctgtgcccgctgcctccctcactccgtctgcccaacagggatggttgtcaagttccag
ggcacagcgcagaggaacactgtctgtgagctgccttccccaggggccagccccaactgc
agcgccagcccccaggactgcaaggcccctgccagcaccgtcccccaggccaagcccacc
ctgacctctccagcaagctctgatgccaggaccacagttctcggagagggcacccccctc
gccccagaagatgcttctaaaatcactgcccgctctagctcctccgtggggaggctcagt
ccagatccaggactgaccctgcaacagccatgccctcaggggtctgtcgactgcaggaag
cagtgtgaccctgactactacctggacagggacggtcgctgcacggcctgtgtgagctgt
tcaggagaccacctcgtggagaagacaccttgcatgtggaactcctcccgcgtctgcgag
tgccgacctggcatgttctgtgccacatcagcctccaactcctgtgctcgctgcgtcatc
cgccccatctgcccaccagggatggtcaccaaggtccagggtacggctgagagggacacc
acctatgagccacctcccccggggacccactctaactgcagcaccaacgcagaggacagc
ggggtgcccgccagccccaccccctccctgatctccctggccgactccctgaccggtaag
gagcgtggaggggacgtcacccacgtgcggggacgcgcctctatctcaaccagcactcct
atatccttctcctccacagggaagcccactctggtttcaggacctgtgctcttctgggtg
atcttgacactggtggtggtcgtcagctttggctcctttctcctgtgccaccggaggggc
tgcaggaagtggatggggcagaagctccacctgtgctacccagtccagaacttccagccc
aagctggagccagtggattccaggcccgggaggaacccgacactgatcaggagggtatcg
gtggcagagccgggccttgaggagcaggggttaatgagctccccagctgtggagacctgc
cccaacctggagagcctgcagctgctggaggccaacccagccagcagcccctccacctcc
atggaccttcctgagccccgaggcaccgcggagcacaccaacaacaggattgagaacatc
tacatcatgaaggctgacaccgtgattgtggggaccgtgaaggccaaggtgcctgagggc
cagggcccggtggggccggcagggcccgagttcgaggaggatctggaggtggaccatgcc
ccccactacccagagcaggagacggaaccactggcgggcagctgtggggacgttatgttc
tcggtggaggaggaagggaaggaggaccccttgcccacgaccgcctctgggaaatga
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