Phocoena sinus (vaquita): 116749374
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Entry
116749374 CDS
T07759
Symbol
TRDMT1
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116749374 (TRDMT1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
116749374 (TRDMT1)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116749374 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
116749374
NCBI-ProteinID:
XP_032479574
Ensembl:
ENSPSNG00000004562
LinkDB
All DBs
Position
2:5209705..5258968
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AA seq
391 aa
AA seq
DB search
MEPLRVLELYSGIGGMHQALRESCIPAQVVAAIDINTVANEVYKYNFPHTQLLAKTIEGI
TLEEFDRLSFNMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLEN
VKGFEVSSTRDLLIQTIGNCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSVPFPFQAPG
QVLMEFPQTESEHPQKHAIDAEKKIEEKKIEPNICSDSSTQCSGKETILFKLETAGEIDR
KRQQDSDLSVPMLRNFLEDDIDMNSYFLPPKSLLRYALLLDIVKPTSRRSTCFTKGYGRY
LEGTGSVLQTTEDVQVENIYRSLTNLSQEEKITRLLMLQLRFFTPKEXANLLGFPPEFGF
PEKTTVKQRYRLLGNSLNVHVVAQLIKILCE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgcgggtcctggagctgtacagcggcattgggggtatgcaccaggcgctg
agagaaagctgtatacctgcacaagtggtggctgccattgatataaacactgtcgctaat
gaagtatacaagtataattttcctcacacacagttactggccaagacaattgaaggtatt
acactagaagagtttgacagattatctttcaatatgattttaatgagccctccctgtcag
ccattcacaagaatcggcctgcaaggtgatgtgactgatccaaggacaaatagcttctta
catattctagacattctcccaaggttacaaaaattaccaaagtatattcttttagaaaat
gttaaaggttttgaagtatcttctacaagagacctgttaatacaaacaataggaaattgt
ggctttcagtaccaagaatttctgttgtctccaacctctcttggcattccaaattcaagg
ctacggtatttccttattgcaaagcttcagtcagtgccgttcccttttcaagcccctggt
caggtactgatggagttcccccaaactgaatctgaacatccacaaaaacatgcgatagat
gcagaaaagaaaattgaagaaaagaaaattgagccaaatatttgctctgatagcagcaca
caatgttctggaaaagaaaccattctttttaagcttgaaactgcaggagaaattgacagg
aaacgtcaacaggacagtgatctctctgtgccaatgctaagaaattttcttgaagatgac
attgacatgaattcatactttttaccgccaaagtcattgctgcgatatgctcttttgtta
gacattgttaagcccacatccagaaggtccacgtgctttacgaaaggttatggacgctac
ctcgaagggacaggatctgtgttgcagactacagaggatgtgcaggttgagaatatctac
agatcccttaccaatttgtcacaagaagaaaagataacaagattgttaatgcttcaactt
cgatttttcactcctaaagaantagcaaatctccttggatttcctccagagttcggattt
cctgagaagacaacagtcaaacagcgttatcgtctacttggaaatagtctcaatgtgcat
gtagtagctcaactaatcaaaatcctgtgtgaataa
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