Phocoena sinus (vaquita): 116750651
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Entry
116750651 CDS
T07759
Symbol
GRIN3B
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04020
Calcium signaling pathway
psiu04024
cAMP signaling pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04724
Glutamatergic synapse
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05030
Cocaine addiction
psiu05031
Amphetamine addiction
psiu05033
Nicotine addiction
psiu05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116750651 (GRIN3B)
04024 cAMP signaling pathway
116750651 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116750651 (GRIN3B)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116750651 (GRIN3B)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116750651 (GRIN3B)
05020 Prion disease
116750651 (GRIN3B)
09165 Substance dependence
05030 Cocaine addiction
116750651 (GRIN3B)
05031 Amphetamine addiction
116750651 (GRIN3B)
05033 Nicotine addiction
116750651 (GRIN3B)
05034 Alcoholism
116750651 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116750651 (GRIN3B)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Glutamate (ionotropic)
116750651 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
CEL_III_C
Motif
Other DBs
NCBI-GeneID:
116750651
NCBI-ProteinID:
XP_032481470
Ensembl:
ENSPSNG00000008329
LinkDB
All DBs
Position
3:683867..692574
Genome browser
AA seq
1026 aa
AA seq
DB search
MEFVWALWLGLALALGPGPAGGHLHPCGVLARLGGLVRLGALLPRAPAARARARATLARA
ALAPRLPHNLSLELAAAAPPSRDPASLARGLCQALAAPGVAAVLAFPEARPELLQLHFLA
AAPETPVLSVLRREARAPLGSPNPFHLQLDWASPLETLLDVLVSVLQAHSWEDVGLVLXR
VRDPGGLVALWTSWAGRAPKLVLDLSRPDTSDAGLRTRLAPLGEAAGGMAPVPVAVLLGC
NEAGARRVLQAAPPGPRWLLGTPLPAKALPTEGLPPGLLALGEVARPPLEAAIRDAVELV
ARALGSAARVQPKRALLPATINCNDLSLPGPESSGRLLARFLANTSFRSHTGPVWVTGSS
QVHISRRFRVWSLRRDPRGAPAWATVGRWQDGRLESEAAGVAGWPPPPPEARARPKLRVV
TRVEHPFVFAREPDEDGRCPAGQLCLAPGSNDSAALDAHFAALADGSAPHVLRRCCYGYC
IDLLERLAEDAPFDFEXYIVGDGRWTGLVGDLLAGRAHMAVTSFSINSAERVVDFTSPFF
STSLGIMVCARDTASPIGAFTWPLHWSMWLGVFTALHLTALFLTLYEWRSPFGLTPRGRN
RGTAFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMSLWAIFCLLVLSSYTANLAAVMV
GDKIFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKKSFPELYAHVRRRSAPTTPHGV
AMLTSPPPKLNAFIMDKSLLDYEVSIDADCRLLTVGKTFAIEGYGIGLPRNSPLTSNLSE
FISRYKSSGFIDLLHGKWYKMVPCGKRVFAVTETLQMGIYHFSGFFVLLCLGLGSALLSS
LGEHVFYRLALPRIRRGNKLQYWLHTGQRIHRALNKEPPNGQQEPEPRGLEEPQQDTLAA
PAGPGGWTRVRRASVRECHTHFLLEPAAAAAAATTPVKDAPDADAAGPPGGPVWLCSNGR
LPAELFSGAPRPGELEQLEQRIAGTREKLRQALVRRGQLLAQLGDGARHGPRSQLQASEE
APVATQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgtgggcactgtggctcggcctggcgctagcgctggggccggggcccgcc
gggggccacctgcacccgtgcggcgtcctggcgcgcttggggggcttggtgcgcctgggc
gccctcctgccccgcgcgcccgctgcccgcgcccgcgcccgcgccaccctggcccgggcc
gccctggcgccgcggctgccgcacaacctgagcctggagctggcggccgccgcgcccccc
tcccgcgaccccgcctcgctggcccgcggcctatgccaggcgctggcggcaccgggcgtg
gcggccgtgctagccttccccgaggcgcggcccgagctgctgcagttgcacttcctggcg
gcggcccccgagacccccgtgctcagcgtgctgcggcgggaggcccgcgctccgctcggc
tccccgaaccccttccacctgcagctggactgggccagccccctggagactctgctggac
gtgctggtgtcagtgctgcaggcgcacagctgggaggacgttggcctggtgctctgacgc
gtgcgggaccctggcggccttgtggccctgtggacaagctgggcgggccgggctccgaag
ctcgtgctggacctgagcaggccggacacgagcgatgcagggctgcggacccgcctggcc
ccactgggggaggccgcggggggaatggccccagtccccgtggccgtactcctgggttgc
aacgaggccggcgcccggcgggtgctgcaggccgcaccccccgggccccgctggctgctg
ggcacgccgctgcccgccaaggcactccccaccgaaggcctgccgcctgggctgctggcg
ttgggcgaggtcgctcggcccccgctggaagccgccatccgcgacgcggtggaactagtg
gcccgcgcgctgggcagtgcggcccgcgtgcagccgaagcgtgccctcctccccgccacg
atcaactgcaatgacctgtcgctgcccggtcccgagtcctccggccgcctcttggcacgg
ttcctggccaacacgtccttccggagccacacggggccggtgtgggtgaccggctcctcg
caggtgcacatctcccggcgcttccgcgtgtggagcctccgccgggacccgcggggcgcc
ccggcctgggccacggtgggcaggtggcaggacgggcggctggagtcagaggcagcgggc
gtggccggttggcccccacccccgccggaagcccgggcgcggcccaagctgcgcgtggtg
acgcgggtggagcacccgttcgtgttcgcccgcgagccggacgaggacggtcggtgcccg
gcggggcagctgtgcctagcccccggcagcaacgactcggcagccctggacgcgcacttc
gccgcgctggccgacggctcggcgccccacgtactgcgcaggtgctgctacggctactgc
atcgacctgctggagcgcctggcggaggacgcgcccttcgacttcgagncttacattgtg
ggcgacggccgctggaccggcctggtgggcgacctgctggccggccgggcgcacatggct
gtcaccagcttcagcatcaactcagccgagcgggtggtggacttcaccagccccttcttc
tccaccagtctgggcatcatggtgtgcgcgcgggacacggcgtcgcccatcggcgccttc
acgtggccgctgcactggtccatgtggctgggcgtcttcaccgcgctgcacctgactgcg
ctcttcctcaccctctacgagtggcgcagccccttcggcctcacgccccgcggccgcaac
cggggcaccgcgttctcctactcctctgccctcaacctctgctacgccatcctctttgga
cgcacagtgtccagtaagacgcccaagtgccccacgggccgcctcctcatgagcctatgg
gccatcttctgcctgctcgtgctgtccagctacacggccaacctggccgccgtcatggtc
ggggacaagatatttgaggagctctcggggatccacgaccctaagctgcaccacccgtcc
cagggcttccgcttcggaaccgtgtgggaaagcagcgcggaggcctacatcaagaagagc
ttcccagagctgtacgcacacgtgcggcgccgcagtgcgcccaccacgccccacggcgtc
gccatgctgacgtccccccccccaaagctcaacgccttcatcatggacaagtcgctactg
gactacgaggtgtccatcgacgcggactgcagactgctgaccgtgggcaagactttcgcc
atcgagggctatggcattggactcccccggaattcgccgctcacctccaacctgtccgag
ttcatcagccgctacaagtcctccggcttcatcgacctcctgcacggcaagtggtacaag
atggtgccttgtggcaagcgggtcttcgctgttacagagaccctccagatgggcatctac
cacttctcgggattcttcgtgctgctctgcctgggcctgggcagtgctctgctcagctcg
ctgggggagcacgtcttctaccgcctggcgctgccgcgcatccgaaggggcaacaagctg
cagtactggctgcacacgggccagagaatccatcgcgccctcaacaaggagccgcccaac
gggcagcaggagccggagccgaggggtctcgaggagcctcagcaggacactctggccgcc
cccgccggcccggggggctggacacgggtgcgccgggcctcggtgagggagtgtcacacg
cacttcctgctggagccggccgcggccgccgccgctgccaccactcccgttaaggatgcc
ccagacgcggacgcggctgggccgcccgggggccccgtctggctctgctccaacggccgc
ctgcccgccgagctgttctcgggcgccccacgccccggggagctagaacagctggagcag
cgcatcgcaggcacacgcgagaagctccgccaggcgctggtgcggcgcgggcagctcctc
gcccagctgggggacggtgcccgccacgggccgcgcagccagctccaggcctccgaggaa
gcacccgtggccacccagtga
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