Phocoena sinus (vaquita): 116751411
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Entry
116751411 CDS
T07759
Symbol
CLCA1
Name
(RefSeq) calcium-activated chloride channel regulator 1
KO
K05027
calcium-activated chloride channel regulator 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04924
Renin secretion
psiu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04924 Renin secretion
116751411 (CLCA1)
09154 Digestive system
04972 Pancreatic secretion
116751411 (CLCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116751411 (CLCA1)
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
116751411 (CLCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA_2
VWA
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
116751411
NCBI-ProteinID:
XP_032483147
Ensembl:
ENSPSNG00000011200
LinkDB
All DBs
Position
1:76942151..76979053
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AA seq
913 aa
AA seq
DB search
MGSFKNSVFILVLHLLEGALSDSLIQLNNNGYEGIVIAVDPNVPEDETLIQQIKDMVTEA
SPYLFEATEKRFYFKNVAILIPQNWSTKPEYVKPKLETYKNADVLVAEPNPTGNDEPYTE
HMGRCGEKGNKIYLTPGFLAGKMLLQYGSQGRVFVHEWAHLRWGVFNEYNNDQKFYLSNK
RKKPVICPSTITGKNVLQKCQGGSCVTQSCKSDRVTGLYEKGCEFIPNEVQTEKASIMYS
QSIPSVVEFCTEKNHNKEAPNEQNKKCNLRSTWEVIQGSEDFKKTTPMTTQPPKPTFSLL
QIGQRVVCLVLDKSGSMTVGDRLKRLNQAGKLFLLQTVEQGSWVGMVTFDSAAYVRSELV
QINSATERDTLTRSLPTAASGGTSICSGILSAFTVIRKKYPTDGSEIVLLTDGEDRTISS
CFNEVKQSGVIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLMDAFGALSSGNG
AVSQHSIQLESRGLTLQNSQWLNGTVIVDSTVGKDTLFLITWTTDIPQILLWDPSGKKQD
GFLVDTYIKMAYLQIPGIAKVGIWKYSLQARSQTLTLTVTSRASSGTLPPVTVTSKMNKD
TGKFPSPMVVYAKIHQGSLPILRAKVTALIESVDGKTVTLELLDNGAGADATKDDGVYSR
YFTAYDTNGRYSVKVWALGGVNTATQKGIPQQIGAMYIPGWIENGQVKWNPPRPEINKDD
LQGKQVCFSRTSSGGSFVASDVPTAPIPDLFPPCKITDLKAKIQGDSLINLTWTAPGDDY
DHGRAHKYIIGISTNILDLRDKFNDSLQVNTTDLIPKEANSEEVFVFKPEHITFTNGTDL
FIAVQAVDKANLKSEISNIAQVSLFIPPETPPETPSPSLPCPDININSTIPGIHILKIMW
KWLGELQLSVALG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatttaagaattcggttttcatcttggtccttcaccttctggaaggggccctg
agtgattcactcattcagctgaataataatggctatgaaggcattgtcattgcagttgac
cctaatgtgccagaagatgaaacactcattcaacaaataaaggatatggtgacagaggca
tctccatatctgtttgaagctacagaaaaaagattctatttcaaaaatgttgccattttg
attcctcaaaattggagcacaaaacctgaatatgtgaaacccaaacttgagacctacaaa
aatgctgatgttctggttgctgaacctaatccaacaggtaatgatgaaccctatactgag
catatgggacgctgtggagaaaagggtaataaaatttatctgactcctgggttcctagca
ggaaaaatgttgcttcaatacggatcacaaggaagggtatttgtccatgaatgggctcat
ctacgatggggagtatttaatgagtacaataatgaccagaaattctacttatccaataaa
agaaaaaaaccagtaatatgtccgtcaactattactggtaaaaatgtactacagaagtgt
caaggaggaagctgtgtcacccaatcatgcaaatccgacagagtaacaggactgtacgaa
aaaggatgtgagttcatacctaatgaagttcagactgagaaggcttccataatgtattca
caaagtataccttctgtggttgaattctgtacagaaaaaaaccacaataaagaagcccca
aacgagcaaaacaaaaaatgcaatctccgaagcacatgggaagtgatccaaggttcggag
gactttaagaaaaccactcctatgacaacacagccacccaagcccaccttctcattgttg
cagatcggacaaagagttgtgtgtttagtccttgataagtctggaagcatgacggttggt
gaccgccttaaacgactgaatcaagcaggcaaacttttccttctgcagacggttgagcaa
gggtcctgggttgggatggtgacatttgacagtgctgcctacgtaagaagtgaacttgta
cagataaacagtgccactgaaagagacacacttaccagaagcttacccacagcggcatca
ggaggaacgtccatctgctctggaattctatcagcatttactgtgattaggaagaaatac
ccaacagatggatctgaaattgtgttactgaccgatggggaggacaggactataagctca
tgctttaatgaagtgaaacaaagtggagtcatcatccatacagtcgccctagggccgtct
gcagcacaggaactagaggagttgtctaaaatgacaggaggtttacagacatatgcttca
gatcaggttcagaacaatggcctcatggatgcttttggggccctttcatcaggaaacgga
gctgtctcccagcattccatccagcttgagagcaggggattaaccctccagaacagtcag
tggttgaatggcacggtgattgtggacagtactgtggggaaagacactttgtttctcatc
acctggacaactgacattccccaaatccttctctgggatcccagcggaaagaaacaagat
ggctttttagtggacacatacatcaaaatggcctacctccaaatcccaggcattgccaag
gtcggcatttggaaatacagcctacaagcaaggtcacaaaccctgactttgactgtcacc
tcccgtgcatcaagtggtaccttgcctccagttacagtgacctctaaaatgaacaaggac
acaggcaaattccctagccctatggtagtttatgcaaagattcaccaaggaagcttgcca
attctcagggccaaggtcacagccctgatagaatcagtggatggaaaaacagttactttg
gaattattggacaatggagcaggtgccgatgctactaaggatgatggtgtctattcaagg
tattttacagcttacgatacaaacggtagatacagtgtaaaagtgtgggctctgggaggt
gtcaatacagccactcagaaggggataccccagcaaattggagccatgtacatacctggc
tggatcgagaatggtcaagtaaaatggaatccaccaagacctgaaattaataaggatgat
cttcaaggcaagcaagtgtgtttcagcagaacgtcctcgggaggttcatttgtggcctcc
gatgttccaacggctcccatacctgatctctttccgccttgtaaaatcactgacctgaag
gcaaaaatccaaggggacagtctcattaatctgacttggacggctcctggggatgattat
gatcacggaagagctcacaagtacatcattggaataagcacaaatattcttgatctcaga
gacaagttcaatgattcacttcaagtgaacaccactgacctcatcccaaaggaggccaac
tcagaggaagtctttgtgtttaaaccagaacacatcacttttacaaatggcacagatctc
ttcattgctgtacaggctgttgataaggccaacctgaagtcagaaatctctaacattgca
caagtatctttgtttattcccccagagactcctccagagacacctagtccttctctccct
tgtcctgatattaatatcaacagcaccattcctggcattcacattttaaaaattatgtgg
aagtggctaggggaattacagctatcagtagccttgggctga
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