Phocoena sinus (vaquita): 116753145
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Entry
116753145 CDS
T07759
Symbol
HLCS
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00780
Biotin metabolism
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
116753145 (HLCS)
Enzymes [BR:
psiu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
116753145 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
116753145 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
116753145 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
116753145 (HLCS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
116753145
NCBI-ProteinID:
XP_032486533
Ensembl:
ENSPSNG00000002751
LinkDB
All DBs
Position
4:complement(137425124..137635973)
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AA seq
903 aa
AA seq
DB search
MLITLCYLYLWARWGRGPAALVRTTVQQLRASHCSFTFCRAAAQPRGARVCLSRGGRVFC
VGESQSIDDLNKWALFLVSPFILEAEHIAFVTESIWVQGDTLQRPPSSSETTSTLHPGSK
VSYLKRRVLRKRWSGWPLQIVKWSDCCLPLACRPGDPYQLIAKASVDDFSKLGVAFLEDR
LQVANGLIPQKIVSVHLHDSALKELEDQASDTPAQLLEPQPEPSVESKPELEAMEHVGRE
DHQVLGSAPTQGQGGALGGEPAGESDRGVGSVEHCHLHLSSCHECLELENSTIESVKFAS
AENIPDLPYDYSSGLEGIAYDLCPKREQRRVNLTGKAPNILLYVGSDSQDALDRLQQVRS
ALADCVDTNCYTLYHLPLESALRDPWPDNCLLVVIATRESVPEDLSRRFMAYLSQGGKVL
GLSSPFTLAGFQVTRKAALQDTVQSLVFCKADWSQVRLSVLSSGCVYEGGPGEPLSLGKL
QGHLDNKDEDRMVVQVPFGTRGGEAVLCQVHLELPPSSPVVQTQEDFNLLKSSNFRRYEV
LKEILTTLGLSCDAKHVPALTPLYLLSAAEEIRDPLMQWLGKHVDAEGVIKSSKLSLKFV
SSYTSEIEITPSAIPVVTDIETFSSENFNFEIYQQNLQTKKLGKVILFAEVTTTTMSLLD
GLMFEMPQEMGLIAIAVHQTQGKGRGRNAWLSPVGSALSTLLVSIPLRSQLGQRIPFVQH
LMSLAVVEAVRSIPGYQDINLRVKWPNDIYYSDLMKLGGVLVNSTLMGETFYILIGCGFN
VTNSNPTICINDLITEYNKQHGAELKPLRADYLIARSVTVLEKLIDTFQDEGPNGVLPLY
YKYWLHSAQQVRLGSAEGPKVWIVGLDDSGFLLVHQENGEVVTVHPDGNSFDMLGNLIIP
KQP
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacctgtacctgtgggcgcgctgggggcgcgggcccgccgcg
ctagtgcgcaccacggtgcagcagctgcgggcctcgcactgctccttcaccttctgccgc
gcggctgcgcagccccggggcgcccgcgtgtgcctgagccgcggcggccgcgtcttctgc
gtcggcgagagccagtccattgatgacttgaacaaatgggccctgtttctggtttctcct
tttatacttgaagcagaacacatagcatttgtgacagagagcatttgggtgcaaggtgac
actttacagagaccaccgtcctcttcggaaactacttcaactcttcaccctggatcaaag
gtgtcctatttgaaacgcagagtcctacggaagcgatggtcaggctggcccctccagatt
gtgaagtggtcggattgttgcttgccgttagcttgcagacctggggatccttatcagtta
atcgccaaagcaagtgtggatgacttcagcaagctgggagtggcgttccttgaagataga
ctccaggtggctaatggactgataccccaaaagatcgtttctgtccacttgcacgactct
gctctgaaggaacttgaggatcaggcctcagacacgccagcccagctcctagagccccag
cctgaaccttctgttgagagcaagcctgagctggaggctatggagcacgtaggtagagag
gaccaccaggttctgggttctgcacccacgcaggggcaaggcggtgcccttgggggcgag
cctgccggggagagcgacagaggcgtgggctccgtcgagcactgtcacctccatctttct
agctgccacgagtgtttggagcttgagaacagcaccatcgaatccgtcaagtttgcctct
gcagagaacattccagatcttccctacgactacagcagtggtttggagggtatcgcgtat
gacctctgccccaagagagaacagaggagggtcaacctcacgggcaaggcacccaacatc
cttctctacgtggggtccgactcccaggacgccctggaccggctccagcaagtccggtca
gctctggccgactgcgtggacaccaactgttacactctctaccacctgccgctggaaagt
gctctcagggacccatggccggacaactgcctgttggtggtcattgccacgagggagtcc
gtccctgaggacctgtcccggaggttcatggcctatctttctcagggagggaaggtcctg
ggcctgtcatcgcccttcacgcttgctggcttccaggtgaccaggaaggccgcactgcag
gacacagtccagagcttggttttctgcaaggcggactggagccaggtgaggctcagcgtc
ctgagcagcggctgcgtttacgaggggggccccggggagcccctcagcctgggcaagctc
cagggccacctggacaacaaggacgaggacaggatggttgtgcaggtgcctttcggaacc
cgtggaggagaagctgtgctttgccaggtgcacctggaactacctcccagctctccagta
gtgcaaacacaagaggattttaacctgctcaaatcaagcaattttagaagatacgaagtc
cttaaggagatcctgacgacgcttggcctaagctgtgacgcaaaacatgttcctgcctta
acgcctctttacttgctgtcggcagctgaggaaatccgggatcctcttatgcagtggctg
gggaagcatgtggatgctgaaggagtaataaaatctagcaagctctcccttaaattcgtt
tcgtcctacacgtctgaaatagaaatcaccccatctgctatacctgtggtaactgacata
gagaccttctcctcagaaaattttaactttgagatctaccaacaaaatttgcagacaaag
aaacttggaaaagtaattctgtttgctgaagtgacaaccaccacaatgagtcttctggac
gggttgatgtttgagatgccacaggaaatgggtttaatcgccatcgcagtccaccaaacg
cagggcaaagggcggggaaggaatgcttggctgagccccgtggggagcgctctttctacc
ctgctcgtctccatcccactgagatcccagctgggacagaggattccgtttgtccagcat
ctgatgtctctggctgtcgtggaggcggtaaggtccattcctgggtaccaggatatcaac
ttacgagtgaagtggcccaacgatatttattacagtgacctcatgaagcttggtggcgtt
ctggttaactcaacacttatgggagaaacattttatatacttattggctgtggatttaac
gtgactaacagcaaccctaccatatgcatcaacgatctcatcacagaatacaataagcaa
catggggccgaactaaagcccttaagagctgattatctcatcgccagaagtgtgactgtg
ctggagaagctgatcgacacatttcaggacgaagggcccaatggcgttcttcctctctat
tataaatattggctacacagtgcccagcaagtccgcctgggaagtgctgagggaccaaag
gtgtggatagtcggcctagatgattccgggttccttctggttcaccaggaaaacggcgaa
gtggtgactgtgcatccagacggcaactccttcgacatgctgggaaacctcataatcccc
aaacagccgtag
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