Phocoena sinus (vaquita): 116755534
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Entry
116755534 CDS
T07759
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04014
Ras signaling pathway
psiu04015
Rap1 signaling pathway
psiu04020
Calcium signaling pathway
psiu04024
cAMP signaling pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04713
Circadian entrainment
psiu04720
Long-term potentiation
psiu04724
Glutamatergic synapse
psiu05010
Alzheimer disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05030
Cocaine addiction
psiu05031
Amphetamine addiction
psiu05033
Nicotine addiction
psiu05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
116755534 (GRIN1)
04015 Rap1 signaling pathway
116755534 (GRIN1)
04020 Calcium signaling pathway
116755534 (GRIN1)
04024 cAMP signaling pathway
116755534 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116755534 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116755534 (GRIN1)
04720 Long-term potentiation
116755534 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
116755534 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116755534 (GRIN1)
05014 Amyotrophic lateral sclerosis
116755534 (GRIN1)
05016 Huntington disease
116755534 (GRIN1)
05017 Spinocerebellar ataxia
116755534 (GRIN1)
05020 Prion disease
116755534 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
116755534 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
116755534 (GRIN1)
05031 Amphetamine addiction
116755534 (GRIN1)
05033 Nicotine addiction
116755534 (GRIN1)
05034 Alcoholism
116755534 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116755534 (GRIN1)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Glutamate (ionotropic)
116755534 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
116755534
NCBI-ProteinID:
XP_032491020
Ensembl:
ENSPSNG00000000703
LinkDB
All DBs
Position
6:complement(702005..724228)
Genome browser
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKNRNYDNLGQLPYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
VLSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGVYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctccttcgcccgtgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggctgtgaaccaggccaacaagcggcacggctcctggaagatccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccttgtcggtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcactcccacccccgtctcctacacagctggcttctaccgcatccccgtcctgggg
ctgaccacccgcatgtccatctactcagacaagagcatccaccttagcttcctgcgcacc
gtgccgccctactcccaccagtcgagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacatcatcctcctggtcagcgacgaccacgagggccgggcggcgcagaagcgcctg
gagacactgctggaggagcgcgagtccaagagtaaaaacaggaactatgacaacctcggc
caactgccctatgacaacaagcgcggacccaaggctgagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggccctgctgatggaggcgcgggagctggaggctcgggtcatc
gtcctctccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgaccggctcggggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgatgccgtgggggtggtggcccaggccgtgcacgagctcctcgagaaggag
aacatcaccgatccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagagtgctcatgtcttccaagtacgcagacggcgtgaccggccgcgtggaa
ttcaacgaggatggggaccggaagttcgccaactacagcatcatgaacctgcaaaaccgc
aagctggtgcaagtgggcgtctacaacggcacccacgttattcccaacgacaggaaaatc
atctggccaggcggagagacagagaagccccgaggttaccagatgtccaccaggctgaag
atcgtgacgatccaccaggagcccttcgtgtatgtcaagcccacgctgagcgacggcacg
tgcaaggaggagttcaccgtgaacggggatccggtgaagaaggtgatctgcaccgggccc
aacgacacgtcgccgggcagcccacgccacaccgtgcctcagtgctgctacggcttctgc
atcgacctactcatcaaactggcgcgcaccatgaacttcacttatgaggtgcacctagtg
gcggacggcaagttcggcacgcaggagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagctgctcagcggacaggcagacatgatcgtggcgccgctgaccatc
aacaacgagcgcgcacagtacatcgagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagcccttccag
agcacgctctggctgctggtggggctgtcagtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagcccctttggccggttcaaagtgaacagcgaggaggaggaggaggac
gcgctgaccctgtcctcggccatgtggttctcctggggcgtcctgctcaactcgggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggccggcttc
gccatgatcatcgtggcctcctacactgccaacctggcggccttcctggtgctggaccgg
cccgaggagcgcatcaccggcatcaacgatccccggctgaggaatccttcggacaagttc
atctacgcgacggtgaagcagagctccgtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactacgagagcgcggccgaggccatccag
gccgtgcgggacaacaagctgcatgccttcatctgggactcagcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgaccaccggcgagctgttcttccgctcaggctttggc
atcggcatgcgcaaagatagcccctggaagcagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctggacaagacgtgggtgcggtaccaggagtgtgat
tcgcgtagcaacgcccctgctaccctcacgttcgagaacatggcaggggtcttcatgctg
gtggccgggggcatcgtggccgggatcttcctgatcttcatcgagatcgcctacaagcgg
cacaaggatgctcgccggaagcagatgcagctggcctttgcagcagtgaacgtgtggaga
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acgcagtaccaccccactgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
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integrated database retrieval system
