Phocoena sinus (vaquita): 116756890
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Entry
116756890 CDS
T07759
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
116756890 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116756890 (SCN9A)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116756890 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Lustrin_cystein
Toxin_22
DUF6739
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
116756890
NCBI-ProteinID:
XP_032493853
Ensembl:
ENSPSNG00000017759
LinkDB
All DBs
Position
7:66617547..66769319
Genome browser
AA seq
1987 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRIAEGKTKEPKEEKKDDDEEGPKPSTDLEAGKQLP
FIYGDIPQGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVRTLLENNETIESILNTLDEEDYGK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGKNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIAMAAAEYTSIERSQIMGLSESSSETSKMSSKSAKERRNRRK
KNNQKKLSIGEEKGDDEKLSISESEESIRRKSFHLGVEGHRRAREKRFSTPNQSPLSIHG
SLFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSSPGLPVNRKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTN
NQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKRLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYVKQTLREFFLKAFSTKPKIS
KEIRRTEDLNYKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESDCQSFIH
NASLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNGSSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRLPCCQVNTESGKGKIWWNIRKTCYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYQCVNTTDGSPFPTSEVENRSECFALMNVSQNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMTIMYAAVDSVNVDRQPIYEYSLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTEVLYWINVVFVILFTGE
CVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPRKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEERFTSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRKNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSPEKTDGTPSTISPPSYDSVTKPDKEKYEKDKTEKEDKGK
DGKEGKK
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtctacttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaaacaaaggaacccaaagaagaaaagaaa
gacgatgacgaagaagggccaaagccaagcactgacttggaagccggcaaacagctgccc
ttcatctatggggacatccctcagggcatggtttcggagcccctggaggacctggaccct
tactatgcagacaaaaaaactttcatagttttgaacaaagggaaagcaatcttccgtttt
aatgccacacctgctttgtacatcctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacactccgcattcagcatgcttatcatgtgcactattctgacgaattgc
atatttatgaccatgagtaaccctccagactggaccaagaatgtagagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtaggagaa
ttcactttccttcgtgacccttggaactggcttgattttattgtcattgtttttgcatat
gtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagttctccga
gctttgaaaacaatttcagtcattccaggcctaaagaccatcgtaggggccctgatccag
tctgtgaagaagctttctgacgtcatgatcctgactgtgttctgtctgagcgtgtttgca
ctgattggactgcagctctttatgggcaacctgaagcaaaaatgtgtgcggactctgctt
gaaaataatgaaacaatagaaagcatattgaatactctcgatgaagaagactatggaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcaccgattca
ggtcagtgtccagaagggtacacctgtgtgaaggttggcaagaaccctgattatggctac
acgagcttcgatactttcagttgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggcagtggtt
gctatggcctatgaagaacagaaccaggcaaacatcgaagaagctaggcagaaagagtta
gaatttcaacagatgttagatcgacttaaaaaagagcaagaggaagctgaggcaatagca
atggcagcagctgaatatacaagcattgagagaagccagataatgggcctctctgagagt
tcttctgaaacatccaaaatgagctctaaaagtgctaaagaaagaagaaacagaagaaag
aaaaataatcaaaagaaactctccattggggaagaaaagggagatgatgagaaattgtcc
atatcggaatccgaggagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaagagattttctacccctaaccagtcaccactcagcattcatggc
tccttgttttctgcaaggcgaagcagcagaacaagtctttttagtttcaaaggtcgagga
aaagatattggatctgagactgaatttgctgacgacgagcatagcatcttcggggacaac
gagagcagaaggggctcactgttcgtgccccacagacctcgggagcggcgcagcagtaat
atcagccaagccagtaggtcctccccagggctgccggtgaacaggaagatgcatagcgcc
gtggactgcaatggtgtggtctccttggtggatggaccctcagccctcatgctccccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagtggtacaaac
aatcaaatacacaagaaaagacgttccagttcttacctcctctctgaggatatgttaaat
gatcccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaactcgaggagtccagacaaaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaaagacttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaatactctgttcatg
gctatggaacatcacccaatgactgatgaattcaaaaacgtgctcactgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtacttccaagtaggatggaatatttttgacagtcttattgtgactttaagcttagtg
gagctttttctagcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gtttttaagttggcaaaatcttggccaacactgaacatgctgatcaagatcattggtaac
tcagtgggggctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgct
gtggtcggcatgcagctctttggtaagagctacaaagaatgtgtctgcaagatcagtgaa
gactgcacactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgctggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattattgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagactgcagtggctagaattaagaagggaataaattat
gtgaaacaaaccttacgtgaattttttctaaaagcattttccacaaaaccaaagatttcc
aaagagataagacgaacagaagatctaaattataagaaggaaaactacatctctaaccac
acacttgctgaaatgagcaaggatcacaattttcacaaagaaaaagataaaaccagtggt
tttggaaacagcatggacaaatacttggtggaagaaagtgattgtcaatcatttattcat
aatgccagcctcacagtgacagtgccaattgcacccggggaatctgatttggaaattatg
aatactgaggaacttagcagtgattcagatagtgaatacagcaaagggaggctgaacgga
tcgagttcctctgagtgcagcacagttgataaccctgtgccaggagaaggagaggaagca
gaggctgagcctgtaaattcagatgagccagaggcctgttttacagatggttgtgtgcag
aggctcccatgctgccaagttaacacagaatcagggaaaggaaaaatctggtggaacatc
aggaagacctgctataggatagttgagcacagttggtttgaaagcttcattgttctcatg
atcttgcttagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtacgctgacaagatattcacttacatctttattctggaaatg
cttctaaaatggatagcatatggttataaaacctatttcaccaatgcctggtgttggctg
gatttcttaattgtcgatgtttctttggttactttggtcgcaaacactcttggctactca
gaccttggccccattaaatcccttcggacacttagagccttaagacctctgagagcttta
tctagatttgaaggaatgagggtggtcgtgaatgcgctcataggtgcaatcccttccatc
atgaatgtgctacttgtgtgtcttatattctggctaatatttagcatcatgggagtaaat
ttgtttgctggcaagttctatcagtgtgttaacaccacagatgggtcaccgtttcctaca
agtgaagttgaaaatcgttctgagtgttttgcacttatgaatgttagtcaaaatgtgcga
tggaagaacctgaaagtgaactttgataatgttggacttggttacctgtctctgcttcaa
gttgcaacatttaaaggatggatgactattatgtatgcagcagttgattctgttaacgta
gacaggcagcccatatatgaatacagcctctacatgtatatttattttgtcatcttcatc
atctttgggtcattcttcaccttgaacttgttcattggggtcatcatagataacttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcaatgaaaaagctgggatccaagaaaccacaaaagccaatacctcgtccgggg
aacaaattccaaggatgtatatttgacctagtaacaaaccaagcttttgatatcgccatc
atggttcttatctgcctcaacatggtaaccatgatggtagaaaaagaaggacaaagtgca
tacatgactgaagttttatattggatcaatgtagtttttgttatccttttcactggagaa
tgtgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaacattttt
gattttgtggtcgtgattctctccattgtaggtatgtttctagcagatttgatagaaagg
tattttgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctt
cctgcgttgtttaacatcggcctcctgctctttctggtcatgttcatttacgccatcttt
gggatgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctagcacctattctcaacagtgcaccacctgattgtgaccccaggaaagttcat
cctggaagctcagttgaaggagactgtgggaacccatctgtggggatattctattttgtc
agttacatcatcatatcattcctggtcgtggtgaacatgtacatcgctgtcattctggag
aacttcagtgttgccactgaagaaagtactgagccgctgagtgaggatgactttgagatg
ttctacgaggtttgggagaagtttgatcccgatgccacccaatttatagaatatagcaaa
ctctctgattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtc
cagctcattgccatggatctgcccatggtcagtggggaccggatccattgtctcgacatc
ttatttgcttttacaaagcgtgttttgggtgaaagtggagagatggactctcttcgttca
cagatggaagaaaggttcacgtctgcaaatccttctaaagtgtcctatgaacccatcaca
actacactaaaacgaaaacaggaagatgtgtctgctactgtcattcagcgtgcttacaga
cgttatcgcttacggaaaaatgtcaaaaacatatcaagtatatacataaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataacgttaatgagaactca
agtccagaaaaaacagatggaactccatccaccatctctccaccttcatatgatagtgta
acaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaggacaaaggaaaa
gatggcaaggaaggcaaaaaatag
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integrated database retrieval system
