KEGG   Phocoena sinus (vaquita): 116757065
Entry
116757065         CDS       T07759                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03020  RNA polymerase
psiu03420  Nucleotide excision repair
psiu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116757065 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116757065 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    116757065 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psiu03021]
    116757065 (POLR2D)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116757065 (POLR2D)
Transcription machinery [BR:psiu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116757065 (POLR2D)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116757065 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 116757065
NCBI-ProteinID: XP_032494289
Ensembl: ENSPSNG00000021774
LinkDB
Position
7:complement(109982159..109989533)
AA seq 142 aa
MAAGGGDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggtggcggtgatccgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcccaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggagcatcgaaagcaacaaaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaaaactttaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtacgtagcttgctgctccagaagaagcttcataagtttgagttggcctgttta
gccaacctttgtccagagactgctgaggagtccaaggctctgatcccaagcctggagggg
cggtttgaagacgaggagctacagcagattcttgatgacatccagaccaagcgcagcttt
cagtattga

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