Phocoena sinus (vaquita): 116759674
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Entry
116759674 CDS
T07759
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00531
Glycosaminoglycan degradation
psiu01100
Metabolic pathways
psiu04142
Lysosome
Module
psiu_M00076
Dermatan sulfate degradation
psiu_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
116759674 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116759674 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
psiu02042
]
116759674 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116759674 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
116759674 (SPAM1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
116759674 (SPAM1)
Bacterial toxins [BR:
psiu02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
116759674 (SPAM1)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Heparan sulfate / Heparin
Enzymes
116759674 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
Enzymes
116759674 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
116759674
NCBI-ProteinID:
XP_032499583
Ensembl:
ENSPSNG00000020149
LinkDB
All DBs
Position
9:complement(27265853..27272626)
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AA seq
554 aa
AA seq
DB search
MGVLRLQPTSFGSFVVSSGVPQAVFTFLLVPCCLTMDFRASPLIANMSFLWAWNAPTDRC
ARRFDMPPDLSLFPLVGDPQKDATGNFITLFYADRLGYYPHINERTGRSVHGGIPQMGSL
KKHLDKAKKDISYYMPIDNVGLAVIDWENWRPTWARNWKPKDTYKNQSIELVLQQNIQLT
FPEAAQIAKVEFEKAAKSFMQETLKLGKLLRPNHLWGYYLFPDCYNHNYHQPSYNGSCRD
IEKSRNDALDWLWKESTALFPSIYLSSKLKSSPKAALYVRNRVQEAIRMSKVASAKSPLP
VFVYARPVFTDVSLQFLSQGDLVNTIGESVALGASGIIMWGSLNLSLTRQSCMNLDNYMK
TTLNPYVINVTLAAKMCSQALCQEQGLCTRKYWNSSDYLHLNPKNFAIKTGKGGKYTVHG
KPTLKDLQQFSKKFYCSCYANIRCKKRVNLKNIHTINVCIAEGVCVDGFLNFKPRNHSSR
WKEISSTTLSNISFSTPTVTVSPCVPGKDLRGCLKVTCSVEALFNNTQGGCHSVNRKNTS
SQLHIQNKKNETTY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggagtactaaggcttcaacctacctcctttgggagctttgttgtgtccagtggagta
ccccaggcagtgttcaccttccttctggttccatgttgtttgactatggatttcagagca
tcccctcttattgcaaatatgtctttcctttgggcctggaatgccccaactgaccgttgt
gctagaagatttgacatgcctccagatctgagcctcttccctttagtaggagacccccaa
aaagatgcgacaggaaattttattacattattttatgctgatagacttggctactatcct
cacataaatgaaagaacaggcagaagtgtgcatggaggaatcccccagatgggatcctta
aaaaagcatttggacaaagctaaaaaagacatttcctattacatgccaatcgacaacgtg
ggcttggctgtcattgactgggaaaactggaggcctacctgggctagaaactggaaacct
aaagacacttacaagaatcagtctatcgagttggttctgcaacaaaatatacaacttact
ttcccagaggctgcccagatagcgaaagtggaatttgaaaaggcagccaagagtttcatg
caggagactttaaaattgggaaaattacttcggccaaatcacttatggggttattatctt
tttcctgactgttacaatcataattaccaccaacctagttacaatggaagttgccgggat
atagagaaaagtagaaacgatgcacttgactggctgtggaaggaaagcactgctcttttc
ccatccatttatttgagtagcaagttaaaatcttctccaaaagctgccctctatgttcgt
aatcgtgtccaggaagccattcggatgtctaaagtggccagtgctaaaagcccacttcca
gtttttgtgtatgcccgtccagtttttactgatgtgtctttgcaattcctttctcagggt
gacctcgtgaatacaattggtgagagcgttgctctaggtgcctctggaattataatgtgg
ggaagtctcaatttaagtctaactaggcaatcttgcatgaacctagacaattacatgaag
actacactgaatccttacgtaatcaatgtcaccttagcagccaaaatgtgtagccaagca
ctttgccaagagcaaggattgtgtacaaggaaatactggaattcaagcgactatcttcac
ctgaacccaaagaattttgctattaaaactgggaaaggtggaaaatacacagtacatggg
aaacccacactcaaagacctgcaacaattttccaaaaaattttactgcagttgttatgcc
aacatccgctgtaagaagagagttaatctaaaaaacattcatactattaatgtatgtatt
gctgaaggtgtttgcgtagatggctttctaaactttaaacccaggaatcattcttctcgc
tggaaagagatatcttctaccactctcagcaatatctcattctctacaccaacggtcaca
gtatctccatgtgttcctgggaaagatctccgtgggtgcctcaaagtcacctgttcagtg
gaagccctcttcaacaacacccaagggggctgtcatagtgttaaccggaaaaacacttcc
agtcagttacatattcaaaacaagaaaaatgaaacaacctattaa
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