Phocoena sinus (vaquita): 116761015 Help Entry 116761015         CDS       T07759                                  Symbol CD4 Name (RefSeq) T-cell surface glycoprotein CD4   KO K06454   T-cell surface glycoprotein CD4 Organism psiu  Phocoena sinus (vaquita) Pathway psiu03250   Viral life cycle - HIV-1 psiu03260   Virion - Human immunodeficiency virus psiu04060   Cytokine-cytokine receptor interaction psiu04514   Cell adhesion molecules psiu04612   Antigen processing and presentation psiu04640   Hematopoietic cell lineage psiu04658   Th1 and Th2 cell differentiation psiu04659   Th17 cell differentiation psiu04660   T cell receptor signaling pathway psiu05135   Yersinia infection psiu05166   Human T-cell leukemia virus 1 infection psiu05170   Human immunodeficiency virus 1 infection psiu05235   PD-L1 expression and PD-1 checkpoint pathway in cancer psiu05340   Primary immunodeficiency Brite KEGG Orthology (KO) [BR:psiu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     116761015 (CD4)    03260 Virion - Human immunodeficiency virus     116761015 (CD4)  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04060 Cytokine-cytokine receptor interaction     116761015 (CD4)    04514 Cell adhesion molecules     116761015 (CD4)  09150 Organismal Systems   09151 Immune system    04640 Hematopoietic cell lineage     116761015 (CD4)    04612 Antigen processing and presentation     116761015 (CD4)    04660 T cell receptor signaling pathway     116761015 (CD4)    04658 Th1 and Th2 cell differentiation     116761015 (CD4)    04659 Th17 cell differentiation     116761015 (CD4)  09160 Human Diseases   09161 Cancer: overview    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     116761015 (CD4)   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     116761015 (CD4)    05170 Human immunodeficiency virus 1 infection     116761015 (CD4)   09171 Infectious disease: bacterial    05135 Yersinia infection     116761015 (CD4)   09163 Immune disease    05340 Primary immunodeficiency     116761015 (CD4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04090 CD molecules [BR:psiu04090]     116761015 (CD4) CD molecules [BR:psiu04090]  Proteins   116761015 (CD4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CD4-extracel C2-set ig Tcell_CD4_C Ig_3 V-set Ig_2 I-set Receptor_2B4 Ig_5 Sp38 Izumo-Ig Motif Other DBs NCBI-GeneID:  116761015 NCBI-ProteinID:  XP_032502568 Ensembl:  ENSPSNG00000005617 LinkDB All DBs Position 10:complement(96564691..96586556) Genome browser AA seq 455 aa AA seqDB search MDPGTSLRHLFLVLQLVMLPAGTQGKKVVLGKAGELAELPCKASQNKSLFFSWKNSYQTK ILGRHGYFWHKGASNLHSRVESKINLWDQGSFPLVIKDLEIPDSGTYICEVEDKKIEVEL QVFRLTASSDTRLLLGQSLTLTLEGPSGSNPSVQWKGPGNKRKNEAKSLSLPQVGLQDSG TWTCTVSQAQQTLVFNKHILVLAFQEVSSTVYAKEGEQMNFSFPLTFGDENLSGELSWLQ AKGNCSPESWITFKLNNGKVTVGKARKDLKLHMSKGLPLRLTLPQALPQYAGSGNLTLNL TKGKLYQEVNLVVMRVTKSPNSLTCEVLGPTSPRLILSLKKENQSMRVSDQQKLVTVLGP EAGMWQCLLSDKGKVLLESKVKILPPVLAHAWPKLLAVVLGGITSLLLLAGFCIFSAKCW HRRRRAERTSQIKRLLSEKKTCHCSHRLQKTCSLT NT seq 1368 nt NT seq  +upstreamnt  +downstreamnt atggaccccggaacctctcttaggcacctgttcctggtgctgcaactggtgatgctccca gccggcactcaggggaagaaagtggtgctgggtaaggcaggagaactcgcagagctgccc tgcaaagcttcccagaataagagcctgttcttcagctggaaaaattcttaccagaccaag attctggggcgtcatggctacttctggcacaaaggtgcctccaacctgcactctcgagtc gaatcaaaaataaacctgtgggaccaaggatcctttcctctggtcatcaaggatcttgaa atacctgactcggggacttacatctgcgaagtggaggacaagaagatcgaggtggaattg caggtgttcagattgactgccagctcggacacccgcttgctgctgggacagagcctgacc ctgaccttggaaggcccctctggtagtaacccttcagtgcaatggaaaggtccagggaat aaaaggaagaatgaggccaagagtctgtcactgccccaggtggggctgcaggacagtggc acctggacatgtaccgtctcccaggcccagcagacgctggtgttcaacaagcacatcctg gtgctggccttccaggaggtctccagcacagtctatgcaaaagagggggagcagatgaac ttttccttcccactcacattcggagatgaaaatctgagcggggagctgagttggctgcag gcaaaggggaattgctcccccgagtcctggatcaccttcaaattgaacaacgggaaggtg actgtgggaaaggctcgcaaggacctcaagctccacatgagtaaggggctccccctccgc ctgactctgccccaggctttgcctcagtacgcaggttctggaaacctgaccctgaatctc accaaggggaagttgtatcaggaagtgaacctcgtggtgatgagagtgactaagtcccca aacagtttgacctgtgaggtgctgggacccacgtcccccaggctgatactgagcttgaag aaggagaaccagagtatgagggtctcagatcagcagaagctggtgaccgtgctgggccct gaagcagggatgtggcagtgtctactgagcgacaagggcaaagtcctgctggaatccaag gtcaagattttgcccccggtgctcgcccacgcctggccgaagcttctggctgtggtgctg gggggcatcaccagtcttctgcttctcgctggattttgcatcttctctgctaaatgctgg caccgcaggcgccgggcagagcggacatctcagatcaagagactcctcagtgagaagaag acctgccactgctcgcaccggctccagaagacatgtagtctcacctga

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