Phocoena sinus (vaquita): 116761974
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Entry
116761974 CDS
T07759
Symbol
POLR1C
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03020
RNA polymerase
psiu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116761974 (POLR1C)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116761974 (POLR1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116761974 (POLR1C)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116761974 (POLR1C)
RNA polymerase I system
RNA polymerase I
116761974 (POLR1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
116761974
NCBI-ProteinID:
XP_032504426
Ensembl:
ENSPSNG00000020863
LinkDB
All DBs
Position
11:72198797..72208368
Genome browser
AA seq
346 aa
AA seq
DB search
MAAAQAVEEMRRRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRFEKNFRVDVVHMDENS
LEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPR
LFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWVPLGN
QADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDIT
LLEPVEGDAAEELSRCFSPGVIEVQEIQGTKVARVASPRLDTSSREVFRNETLKKVVRLA
RVRNHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcccaggcagtggaggaaatgcggaggcgcgtggttttaggggagttcggg
gttcgcaatgttcataccaccgactttcccggtaactattcgggctacgatgatgcctgg
gaccaggaccgcttcgaaaagaatttccgcgtggatgtggtacacatggatgaaaactca
ttggagtttgacatggtgggaatcgacgcagccattgccaatgcttttcgacgcattcta
ttagctgaggtgccaaccatggctgtggagaaggtcctggtgtacaacaacacttccatt
gtccaggatgagatcctcgctcaccgcttggggctcatccccattcatgctgatccccgc
ctttttgaatatcggaaccaaggagatgaagaaggcacagagatagataccctgcagttt
cggctgcaggtcaggtgcactcggaacccccacgccgctaaagattcctctgaccccaat
gagctctatgtcaaccacaaagtgtacaccaggcacatgacatgggtccccctggggaac
caggctgacctcttcccggagggcaccatccgaccggtacatgatgatatcctcatcgct
cagctgcggcctggccaggagattgacctgctcatgcactgcgtcaagggcattggcaaa
gatcatgccaagttttcacctgtggcaacagccagttaccggctcctgccggacatcacc
ctgcttgagcccgtggaaggggatgcggctgaggagctgagccggtgcttctcacctggt
gttattgaggtgcaagaaatccaaggtacaaaggtggccagagtcgccagcccccggcta
gacacgtccagcagggaggtcttccggaacgagacgctgaagaaggtcgtacggctggct
cgcgttcggaaccattacatcttctctgtggagtcaacaggggtgttgccaccagacgtg
ctggtgagtgaagccatcaaggtactgatggggaagtgccggcggttcttggatgagctg
gatgcggttcagatggattga
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