Phocoena sinus (vaquita): 116761981
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Entry
116761981 CDS
T07759
Symbol
GLB1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00052
Galactose metabolism
psiu00511
Other glycan degradation
psiu00531
Glycosaminoglycan degradation
psiu00600
Sphingolipid metabolism
psiu00604
Glycosphingolipid biosynthesis - ganglio series
psiu01100
Metabolic pathways
psiu04142
Lysosome
Module
psiu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
116761981 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
116761981 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
116761981 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
116761981 (GLB1)
00511 Other glycan degradation
116761981 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116761981 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116761981 (GLB1)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
116761981 (GLB1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116761981 (GLB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
116761981
NCBI-ProteinID:
XP_032504450
Ensembl:
ENSPSNG00000009100
LinkDB
All DBs
Position
11:51713399..51804300
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AA seq
652 aa
AA seq
DB search
MPGVVRILSLLLVPLLLGSARGLHNASQRTFEIDYGHNCFLKDGQPFRYISGSIHYFRVP
RFYWKDRLLKMKMAGLNAIQTYVAWNFHEPQPGQYEFTGDHDVEHFIQLAHELGLLVILR
PGPYICAEWDMGGLPAWLLEKGSIVLRSCDPDYLAAVDKWLGILLPKMRPLLYQNGGPII
TVQVENEYGSYYTCDYNYLRFLQKRFHYHLGEDVLLFTTDGAHESFLQCGALQGLYATVD
FGAGVNITAAFLTQRKSEPKGPLVNSEFYTGWLDHWGQPHSTVKTKTVASSLHDILSQGA
SVNMYMFIGGTNFAYWNGANTPYQAQPTSYDYDAPLSEAGDLSEKYFAVRDVIQQFEKVP
EGPIPPSTPKFAYGKVGLKKLKTVEEALDILCPSGPVKSVYPLTFIQVKQYFGFVLYRTT
LPQDCSDPTPLSSSFNGVHDRAYVSVDGVPHGVLERNTVITLNITGKAGATLDLLVENMG
RVNYGSSINDFKGLISNLTLGSNILTNWEIFPLDMEDAVRSHLGTWDGHDSGCAHSPSDY
TLPAFYVANFSIPSGIPDLPQDTFIQFSGWTKGQVWINGFNLGRYWPARGPQMTLFVPQH
ILVTSAPNTVIVLELERAPCGDDGPELCTVEFVDRPVLGAAKTHSHVPTDQH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggtcgttcgcatcctctccctgctgctggtgccgctgctgctgggctctgcg
cgtggcttgcacaacgcctcccagaggactttcgagattgattacggccacaactgcttc
ctcaaggatggccagcccttccgctacatctcgggaagcattcactatttccgcgtgccc
cgtttctactggaaggatcggctgctgaagatgaagatggctggactgaatgccatccag
acgtacgtggcctggaacttccacgagccccagccaggacagtacgagttcacaggggac
cacgacgtggagcattttattcagctggcacatgagctgggactgctggtcatcctgagg
cctggaccgtacatctgtgcggagtgggacatgggaggattacctgcttggctactggag
aaaggatctattgttctccgttcttgtgatccagattaccttgcagctgtggacaagtgg
ttgggaatccttctgcccaagatgaggcccctcctctatcagaacggagggccgattata
acagtgcaggttgaaaatgaatatggcagctactatacctgtgactacaactacctgcgt
ttcctgcagaagcgtttccactaccacctgggtgaggacgtgcttctgttcaccacggac
ggggcgcatgagagcttcctgcagtgcggggcactgcaggggctctatgccaccgtggac
ttcggagcaggtgtcaacatcacagctgctttcctaacccagaggaagagtgaacccaaa
ggacccttggtcaattctgaattctacactggctggttagaccattggggccaacctcac
tcaacagtcaagactaaaacggtggcttcctcccttcacgatattctttcccaaggggcc
agtgtgaacatgtacatgtttataggtggcacgaattttgcctattggaatggggccaac
acgccctaccaagcacagcccaccagctacgactacgatgcccccctgagcgaggccggg
gacctcagtgagaagtattttgctgtgcgggatgttattcagcagtttgaaaaagtacct
gaaggccctatccctccatccacaccgaagtttgcatatggaaaagttggtctgaaaaag
ttaaagacagtggaggaagctctcgacattctgtgtccctctggacccgtaaaaagcgtt
tatcccttgacatttatccaggtgaaacagtactttgggtttgtgctgtaccgaacaaca
cttcctcaagactgcagcgacccaacacccctctcttcgtccttcaatggcgtccatgat
cgggcctacgtctctgtggatggggtcccccacggagtccttgagcgaaatactgtgatc
accctgaacatcacagggaaagctggagccaccctggacctcctggtggagaacatgggg
cgtgtgaactacggcagttctatcaacgattttaagggtcttatttctaacctgaccctt
ggttccaatatcctcaccaactgggagatcttcccactggacatggaggatgcagtacgc
agccacctggggacctgggatggccatgacagcggctgtgcccacagcccatctgactac
acactcccggccttttatgtggctaatttctctattcccagtgggatcccagacttgccc
caggacacctttatccagttttccggatggaccaagggtcaggtgtggattaatggcttt
aaccttggccgctactggccagcacggggcccccagatgaccttgttcgtgccgcagcac
atcctggtgacctcggccccaaacaccgtcatcgtgctggagctagagcgtgcgccctgt
ggggacgatggcccagaactgtgcactgtggagttcgtggacaggccggtgctcggtgca
gccaagacccacagccatgtccctacagaccaacactaa
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