KEGG   Pseudomonas solani: PSm6_27800
Entry
PSm6_27800        CDS       T09213                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psoa  Pseudomonas solani
Pathway
psoa00740  Riboflavin metabolism
psoa01100  Metabolic pathways
psoa01110  Biosynthesis of secondary metabolites
psoa01240  Biosynthesis of cofactors
psoa02024  Quorum sensing
Module
psoa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PSm6_27800 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSm6_27800 (ribD)
Enzymes [BR:psoa01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PSm6_27800 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PSm6_27800 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BCD86373
LinkDB
Position
3052894..3054024
AA seq 376 aa
MTQNDQAFMARALELARKGLYSTHPNPRVGCVIVRDGRIVGEGWHARAGEPHAEVHALRQ
AGDKARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVSGRGLLRLMQA
GIAVQSGVLEAEARALNAGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPDARA
AVQRLRARASVVLTGADTVLADGARLTVRPDELGLNAELTALALDRPPLRVLVDGRLRVP
LSAPFFQAGPALVATCAAAAARDRFQDDGHELLAVPGSNGHVDLKRLLAELASRGANEVL
VEAGPRLAGAFARAGLVDEYQIFMAGRILGSSARPLLDWPLARMAEAPQLKIVEMRAVGD
DWRIIAVPVASSKPEA
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgacccagaacgatcaggccttcatggcccgcgcactcgagctggcccgcaagggcctg
tattccacccatccgaacccccgcgtcggctgtgtgatcgtccgggacgggcgcatcgtc
ggcgaaggctggcatgcccgcgccggcgagccccatgccgaagtccacgccctgcgccag
gccggcgacaaggcccgtggcgccaccgcctacgtcaccctcgaaccctgcagccaccat
ggccgcacgccgccctgcgccgatgccctggtcaatgccggtgtggcgcgggtggtggcg
gcgatgcaggaccccaacccagaagtctccggccgtggcctgctgcgcctgatgcaggcc
ggcatcgccgtgcagagcggtgtgctggaagccgaagcccgtgcgctgaatgccggcttc
atcaagcgcatggaacagggcctgcccttcgtccgcgtcaagctggcgatgagcctggac
ggccgcaccgccatggccagtggcgaaagccagtggatcaccgggcccgatgcccgcgcc
gccgtgcagcgcctgcgcgcccgcgccagcgtggtgctgaccggggccgacaccgtgctc
gccgatggcgcgcgcctcaccgtgcgcccggacgagctgggcttgaatgccgagctcacc
gccctggcgctggatcgcccgccgctgcgcgtgttggtggatggccgcctgcgcgtgccg
ctgtccgcccccttcttccaggccggcccggcactggtggccacctgcgctgccgccgcc
gcgcgcgaccgcttccaggacgatggccacgagctgctggcggtgccgggcagcaatggc
cacgtcgacctcaagcgcctgctggccgagctggcctcgcgcggcgccaatgaagtgctg
gtggaagccggcccccgcctggccggcgccttcgcccgtgccgggctggtggacgagtac
cagatcttcatggccgggcgcatcctcggctccagcgcccgcccgctgctggactggccc
ctggcacggatggccgaggcgccgcagctgaagatcgtcgagatgcgcgcggtcggggat
gactggcggatcattgcggtgccggtcgcaagctcgaagcctgaagcctga

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