KEGG   Papaver somniferum (opium poppy): 113279779
Entry
113279779         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113279779
  09124 Replication and repair
   03420 Nucleotide excision repair
    113279779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113279779
   03400 DNA repair and recombination proteins [BR:psom03400]
    113279779
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113279779
  RNA polymerase III system
   RNA polymerase III
     113279779
  RNA polymerase I system
   RNA polymerase I
     113279779
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113279779
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N TetR_C_5 zf-CCHC
Other DBs
NCBI-GeneID: 113279779
NCBI-ProteinID: XP_026384231
LinkDB
Position
5:complement(143759576..143773781)
AA seq 406 aa
MVDTISEASIKANVIEGRLQKTDVEENAKGKSGSFVTKRDERSKEKGKSNDREGLVCNHC
KQIGHVVDKCWMKYPNLKPKGLQKKEAIMATLVTQVPKEVQGLTDPNQKLSLMAGGVEEL
TKDDPRERLFTVKMQVKTTLIDIVIDPGILGSPYLWDRDAVLHRREQKYTFTKDGKDFVI
RSINSPLEGASLITTTRAKRYPSSQNQVTRLFRIRRTVMHMLNDRGYLVGDFEINETRAE
FLTRFVDTFMRENLDIKKSMRNDSNDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIV
VAQQNLTPVAKKFIGEFSSKFHMEVFQEAELLVNISRHVLVPEHQLLTPEEKKTLLERYT
LKETQLPRIQITDHIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggtagatacaatctccgaagcaagcataaaagctaatgtcattgaaggcaggcttcag
aaaactgatgttgaggaaaacgccaaggggaagtctggaagtttcgtcactaaaagagat
gaaaggagcaaagagaaagggaagtctaatgaccgagaaggtttagtttgtaatcattgc
aaacaaatagggcatgttgttgataagtgttggatgaagtatcctaatctaaaaccaaaa
gggttgcagaagaaagaagccataatggcaacactagtcacacaagttccaaaagaagtc
caaggactaacagaccctaatcaaaagctctctctaatggcaggaggcgtggaagaactt
acaaaagacgatcctagggaacgactcttcacggttaagatgcaggttaagacaacacta
atagatattgttattgacccgggaatacttggtagtccttacttgtgggatcgagatgcg
gttttacataggagggagcaaaagtatacctttaccaaagatgggaaagattttgtaata
cgatctattaactctcctcttgagggagcaagcttgattacaaccactcgggctaaacga
taccctagctctcaaaaccaagttacgaggctgttcagaatccggcgtacagtgatgcat
atgttgaatgacagaggttacttagtcggagattttgaaatcaacgagacaagagcagaa
tttctcactagatttgtggatacttttatgagagaaaatcttgatatcaagaaaagcatg
agaaacgatagtaatgatcatatatatgttttcttccctaataatcccaaagttaacatt
gatacaatgaagatttgcattaaacggatgcagaatgatgaggtctacaaggcaattgtg
gttgctcaacagaatttaactcccgttgccaagaagtttatcggtgaattttcttccaag
ttccatatggaggtcttccaggaagcggagctgcttgtcaacatcagtcggcatgttctt
gtccctgaacatcaacttctcacacccgaagaaaagaaaactttgctggagcgttatact
ctgaaagaaactcagctaccccgaattcagattacagatcacattgctagatattatgga
ctaaaacgtgggcaagtggtgaagattatcaggcctagtgagacagcagggagatacgtc
acatacagatatgttgtttga

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