Papaver somniferum (opium poppy): 113281981
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Entry
113281981 CDS
T05758
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113281981
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113281981
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113281981
03036 Chromosome and associated proteins [BR:
psom03036
]
113281981
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113281981
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113281981
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113281981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
TAF6_C
CLASP_N
Adaptin_N
Cnd1
DUF900
DUF3102
Motif
Other DBs
NCBI-GeneID:
113281981
NCBI-ProteinID:
XP_026386680
LinkDB
All DBs
Position
5:78246864..78252132
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AA seq
587 aa
AA seq
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MATMDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGIDYANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DLVDSFVPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEVMKTELRTIYSQLCQDDMPMVR
RSAASNLGKFAATVESAHLKTDIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEVQDCVT
HILPVVVNFSQDKSWRVRYMVANQLYELCEAMGPEPTRVDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILQAISLLAPVMGSEITCSKLLPIAINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEQTIRPCLVELGEDPDVDVRFFASQALQASDQVMMSN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctacgatggatgagccactgtatccaatagcaatattgatagatgagttaaaaaac
gaagatattcagcttaggttaaactcgatacgtaggctatcaaccattgcacgggcatta
ggcgaagaaagaacgcgaaaagaattgataccattccttagtgaaaataatgatgatgat
gatgaagtgttacttgcaatggctgaagaattgggtgtttttataccgtatgttggtggt
attgattatgcaaatgtgttgttgccaccattggagacactttgtactgttgaagaaact
tgtgttagggacaaagctgttgagtcattatgtcgaattggtgctcaaatgaaggagtct
gacttggtcgattcatttgttcctcttgtcaagagactggcagctggtgagtggtttaca
gctagggtttcatcatgtggactgtttcacattgcttatcccagtgccccagaggttatg
aagacagaattgaggactatatacagtcaattgtgtcaggatgacatgcctatggtgcga
agatctgccgcatcaaacttgggaaagtttgctgctactgttgaatctgcccatctgaag
acagatatcatgtcgattttcgatgatctgactcaggatgatcaagattctgttcggtta
ttggccgtggagggttgtgcagcacttggaaagttgttggaagtgcaagactgtgtgaca
catatcctccccgtcgtcgtgaatttctcgcaggataaatcttggcgtgttcgttacatg
gtggcaaatcaattgtacgagctttgtgaagctatgggacctgagcctaccagggtggac
ttggttcctgcatacgtgcgtctgcttcgtgataatgaggcagaagtacgaattgcagct
gctggaaaagtaaccaagttttgcagaatcttgaacccacaacttgcaattcagcacatt
cttccctgtgtgaaggagttgtctacagactcttctcagcatgtgcgctctgccttggcc
tcagtgataatgggaatggcaccagtcttggggaaggatgcaacgattgagcaactttta
cctatatttctttctttactgaaagacgaattccctgatgttaggctcaatatcatcagc
aagcttgaccaagtgaaccaggtgattggaattgatctattgtcacagtcgttgttacct
gctattgttgagctagcagaggatagacattggagagttagacttgcaataatagagtac
atacctctattggcaagccaattgggtgttggattctttgatgacaagctaggtgctcta
tgcatgcagtggctggaagacaaggtgtattctattcgagatgctgctgctaataacttg
aagcgccttgcagaagagttcggccctgaatgggcaatgcagcacatagttccacaggta
ctcgagatgattaataatccacactatttgtaccggatgactattttacaagcaatttct
cttctagcccctgtcatggggtcagaaattacatgctcaaagctgcttcctattgcaatc
aatgcatcaaaagatagagtaccaaacatcaaattcaacgttgcgaaggtcttgcagtcg
ctcattcccatagttgatcaatctgtggtcgagcagacaatacgtccctgcttggttgaa
ctcggtgaggaccctgatgtggatgtcaggttttttgccagccaagcacttcaagctagt
gatcaagtcatgatgtctaactaa
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