Papaver somniferum (opium poppy): 113283398
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Entry
113283398 CDS
T05758
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113283398
Enzymes [BR:
psom01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113283398
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113283398
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
113283398
NCBI-ProteinID:
XP_026388419
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Position
5:complement(159565035..159570835)
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AA seq
640 aa
AA seq
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MDDIEDMLVGNDGAPPGFRLPVMSVGLNPKLRQKKKKNEDTPNLKHLTQDIPSNPSPQVP
GTQTIYMKTFGCSHNQSDSEYMAGQLSAFGYALSDNPDDADLWLINTCTVKSPSQSAMDT
LIVKCKTAKKPLVVAGCVPQGSRDIKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTR
KTLPALDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIDGLVERVKAVAAH
GVKEIWLSSEDTGAYGRDIGTNLPTLLNAIVAVLPPDRSTMLRIGMTNPPFILEHLKEIA
AVLSHPCVYSFLHVPVQSGSDPVLTAMHREYTVSEFKKVVDTLLELVPGMHIATDIICGF
PGETDENFAETVNLVKEYKFPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFES
FTPYQGMEGQIERIWITEIATDGVHLVGHTKGYIQVLVIAPEAMLGTSTDVKITSVGRWS
VFGEVIDTPKSDMEKETGSRERKSIDEKMFACSGVPTYPNESLPCSDMDESCACSREPEP
CACAGQSCGESNLVDKTTAKTEDGNRKNLIGWLLRKRKVLNGTERLETKSGLESEDKQDT
SKGNTVRSSAIDRALLVAMLISFLTILGLLVLIGFRIQFP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatcgaagatatgttagtcggaaacgatggagctcctcctggatttcgtttg
ccggtaatgtctgttggtttaaaccctaaactacgccagaagaagaagaagaatgaagat
acacccaatctcaaacatctaactcaagatattccttctaatccttctcctcaagtccct
ggaactcaaactatatacatgaagactttcggatgttcgcataaccagagtgatagtgaa
tatatggctggtcagctttcagcatttggatatgcgttgagtgataatcctgatgatgca
gatctttggctgatcaatacatgcacagtgaaatctcctagccagtctgctatggacacg
ctaatagtgaaatgcaaaactgccaaaaagccactggtagtggcaggatgtgttcctcag
ggaagtcgagatataaaggagctagaaggggttagcatagttggagtacagcaaattgac
cgtgttgttgaagttgtggaggagactctgaaaggtcatgaggtgcggcttttgactcgc
aagacattgccagctcttgaccttccaaaggtgaggaagaacaagtttatagagattctt
ccaataaatgttggttgtttgggtgcttgcacttactgcaagactaagcatgctcgtggg
catttgggaagctacactatagacggtcttgtagagcgtgtaaaagctgtcgcagctcat
ggagttaaggagatatggttaagtagtgaggacaccggagcatatggccgcgatattgga
accaatcttccgactttgctaaatgctattgttgcggtactcccccctgatagaagtact
atgcttcgaattgggatgaccaatccaccttttattctagaacatttaaaagagatagct
gcggtcctcagtcacccgtgtgtatattcttttcttcatgttccagtccaatctggaagt
gaccctgttttgactgcaatgcatcgagaatatactgtgagtgagttcaaaaaagtggtg
gatactcttctcgaactagtacctgggatgcatattgctactgatataatttgtggtttc
cctggtgaaactgatgaaaattttgctgaaactgtcaaccttgttaaagagtacaagttt
cctcaggttcatatctcacagttctatccaagacctggaacacctgcagcaaggatgaaa
aaagtcccaagcgctatagtaaagaagcggagccgtgaacttacttcagtatttgaatca
tttactccatatcagggaatggaggggcaaatagagaggatatggattactgaaattgcc
actgatggagttcacttggttggtcatacgaagggatacatacaagtcctcgtgattgct
cctgaggccatgctaggcacttcaactgatgtgaagattacctcagttggaaggtggtca
gtttttggtgaggtgatcgatactccaaaaagtgatatggaaaaagaaacaggttctcgt
gaaagaaaatcaattgatgagaaaatgtttgcctgctctggagtacctacttatcccaat
gaaagtcttccttgctctgacatggatgaaagttgtgcatgttcaagagagccggaacct
tgtgcatgtgcaggtcaaagttgtggggagtctaatcttgtagataagactactgcaaag
acggaagacggaaacaggaaaaacttaattggatggctactgagaaaacgtaaagtacta
aatggaacggagaggttggaaaccaagagtggattagaatccgaagacaaacaagacaca
tcaaaaggaaacacagtgaggtccagtgctatagatagggctctactggttgcaatgctc
ataagttttctaaccattctaggtttgctggtgctgataggttttaggatacaatttcct
tga
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