KEGG   Papaver somniferum (opium poppy): 113288632
Entry
113288632         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113288632
  09124 Replication and repair
   03420 Nucleotide excision repair
    113288632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113288632
   03400 DNA repair and recombination proteins [BR:psom03400]
    113288632
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113288632
  RNA polymerase III system
   RNA polymerase III
     113288632
  RNA polymerase I system
   RNA polymerase I
     113288632
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113288632
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM FtsA_C
Other DBs
NCBI-GeneID: 113288632
NCBI-ProteinID: XP_026393509
LinkDB
Position
6:102045225..102047138
AA seq 171 aa
MADDDNDMGDMGYEDEPVEDIMEGEEEEVENNNEDEAAEQVVLEGEEKEEAEPVKKDRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGSNHNDHSINLGFSVTLAAICSVLLVCYVSR
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcggacgatgataatgatatgggtgatatgggatacgaggatgaaccagttgaggat
attatggaaggagaagaagaggaggttgagaataacaatgaggatgaggctgctgagcaa
gtggttttagaaggtgaagagaaagaggaagctgaaccagttaaaaaagatcggaagacg
tctaagtttatgaccaagtatgaacgagcaagaattcttggtacccgcgctctgcagatt
agcatgaatgcaccagtgatggttgagctggagggggagactgatccacttgagattgcc
atgaaagaactccgggcccgcaagatacctttcaccatccgtcgctacttgcctgatgga
agttatgaagattggggagttgatgagctgatcgttgaagactcttggaagagacaagtt
ggcagcaatcacaatgatcattcgatcaatctggggttctctgtcacactggcagcaata
tgttccgttctcttggtctgttatgtctctagataa

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