Papaver somniferum (opium poppy): 113309946
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Entry
113309946 CDS
T05758
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113309946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113309946
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113309946
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113309946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
113309946
NCBI-ProteinID:
XP_026414248
LinkDB
All DBs
Position
9:90216457..90229391
Genome browser
AA seq
1169 aa
AA seq
DB search
MGENTEKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHK
LLFPEKGAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMS
KRCNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQD
GYTDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHE
IYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMG
GLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHE
VLLPGHLITLYLKDRLQQWLKKGKQLLEEELRRKSPSFDFGIVEMVKKVMNKYPSKSVGS
AIENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRK
LLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIG
MIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGY
VPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGG
RKNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQ
KLYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMC
RGQIYQVETVDLKEDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIR
NTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHG
QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDA
TPFASSTKVKDGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVY
YQRLRHMVSDKFQVRSTGIVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRL
HTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMET
VAMPYVFRYLAAELAAMNIKMTLKLTNGA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagaatactgaaaaggagtttgagaacttaagagaactatttaaaccacatatt
gagtctttcgattacttaatcgatgagggtttggaaaaaattcttgtcaacattaaacca
gttgaggttgttaatgaatccaccggccagacacttcgaatttggtttgataaccataaa
ttgctctttccagagaagggggctaagggtgtgcgcgataaaatctatccttacgagtgt
cggcaggcaaaagaatcctactcgggagaactgaaaatcagtgtttgtttccaatatgac
aagggacacgtacaacgccatgatatgtattttggggatgttccaataatgttaatgtcg
aagcgttgtaacttaagaaaggctaatcctgcaaaactagtttcgcacaaagaagaggca
acagaaatgggcggctattttatcctgaaaggtctggagcgacttatgcgaataataatt
atgcaaaagcgaaacttcccgttgaatgttgaaaggaattcatttcgggaaaaacaagat
gggtatacagataaagcagttgttattagatgcgttagagtggatatgtctgccttaact
cttcggttgtattacctccaaaatggaagtgctagacttggtttctggctggatgggagg
gagttcttacttccagtgggtgttatcttgaaggccctcattgacactaatgaccatgaa
atctatgtgagcttgacatgttgccataatgaggtgcatcagaaaggaaagggagttgtt
ggcacccaacttgttggtgaaagggttaagattattcttgatgaagtccgcagcttgtct
ctcttgactcaacaacaatgtttacattatttaggtgaatccttcagaccagtcatgggt
ggactagaaactgaaagcggttctattattggagacacagttctaagagattatgtattt
attcatcttgagaacaaccacgataaattcaatctgctcatttttatgctgcagaagctg
tttgcatttgtagatcaaaccgtggcaccggataacacagatgcattgcaaaatcatgag
gtgttacttcctgggcatttgataacattatatctcaaggatagattgcaacagtggttg
aagaaaggaaaacagttacttgaagaagaattacgcaggaaaagcccaagttttgatttt
ggtattgttgaaatggtgaagaaggttatgaataaatatccctccaaaagtgttggatca
gcaattgagaatctgctaataatcggtacactgcagtcacagtcagggttagatctaccg
cagaggaaaggatttaccattcaagcagagaggctcaattttcttcgttttgtttcgcac
tttcgatctgttcatcgaggtgcagcatttgcaggacttcgcagcacaagtgttcggaag
ttgctaccggaatcctgggggtttctttgcccagttcacacacctgatggggaaccatgt
ggtttgttgaaccacttgacttctacgtgccgtatcacttcgtactacgattcaaatgga
acagttaaggactttttgaaaatccgaaagtccatagtgagtgttttgactggaattgga
atgataccatcattgcctaagcttgtccgagcggggccccctgaagttgtttttgttctt
ctagatgggtgtgtcgttggttctatatcttctaatattgttgagaaagctgtggaacat
attaggagattaaagctatcaccatattctgggattcctgatgatttggagatcggatat
gttccattaaccatgggtggtgcatatccggggttgtaccttttcacctctccttctaga
tttgttcgaccagttagaaatatttctatcccgtcggaagagaatcagaatattgagctt
attggtcctttcgagcaggtctatatggaaattcgatgtgctgatggtggagaaggggga
aggaaaaacaattttcccgcaactcatgaagagatccaccctactggaatgcttagtgta
gttgccaatttgacaccttggtcggatcataatcaaagtccacgaaacatgtaccagtgc
cagatggcaaaacagactatgggtttctcttcacaggcaataaagtttcgtgcagatcag
aagctataccatctacagactcctcaaaatcccattgtgcgtactgaatcatattcaaaa
tatcacgtcgaagaatttcccaacgggacaaacgcaattgttgcagttttggcatatacg
ggatatgatatggaagacgccatgatcttgaacaagtcatctgtagagcgtgggatgtgc
cgcgggcagatataccaggtggaaactgttgacttgaaagaagatggaaaagaaaaagag
ggcccaagggtatttgataggagtagattagataactcacttaaccatatgattgatcgc
gacggttttcctcacgttggacaggtgttaaagccaaaagatccatattgcagcatccgg
aatacaacaacagataaatttgaatttaagagggtaaagggctcgggcgaggaacctgtt
tatgttgactatgtggcaattgatgtgaatgactccaaaaaggacccacataaggtgaat
attcgttttcgtcatcctaggaatcctataattggtgacaagttcagcagtagacatggg
caaaaaggtgtttgttctcagttatggcctgacattgatatgccattctcaagcgtaaca
ggaatgcgcccagatctaatcatcaatccacacgcattcccttctagaatgacgattgga
atgcttttggaatctatagctgcgaagggaggcagcttgaatggaaaatttgtcgatgca
accccttttgctagctcaaccaaagtgaaggacggaaagtcggaaaaatcaagctctctt
attgatgaacttggttcacagttggtcgctaaagggtttcagtatcatggattggaggtc
atgtacagtggctttcttggaacagaaatggcttgtgaaatttttataggacctgtatat
tatcagcgtctccggcacatggtttctgacaagttccaggttaggtccacgggtattgta
gaccaaattacaagacagcccataaaaggaagaaaacgaggtggaggtattcggtttggg
gagatggagagagattcaatgcttgctcatggagctgcatatctgttgcatgacaggctt
catacttgttctgatcatcacattgccgatgtttgttcactttgcggaagtcttctcaca
acaacctctgcccaaacacataaaagaatagtccgagaacagggagagaagttacctcca
ggaaggatccctaaaaaggttacctgtcatgcatgtaaaactagcaaagggatggaaaca
gtggctatgccctatgtgttcaggtatttggctgcagaattagcagcgatgaatataaaa
atgactctcaaactaactaatggagcataa
DBGET
integrated database retrieval system
