Papaver somniferum (opium poppy): 113333262
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Entry
113333262 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113333262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113333262
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113333262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
113333262
NCBI-ProteinID:
XP_026435565
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MAPSRRLSNGRSPLVNKQSQITAFFTPGKSTTSVSPSSAPSVKQNPKSTPPNPKSIPPKP
KSNDSKKPLLVIGSDDHPSPSTPASNLSSIKTPESGKRLYGESVIRKRIRVYWPIDKQWY
DGFVKSFDSLSGKHLIQYDDSEEEELNLEKEKIEWVEEEKKTTFRRLKRNLASENVVLDV
VEKEEVKSSSGRSRRGLKMVVVEDDEEEEGGSGGDDSEDEDWGKNVEKEIIDDEMEEMDL
VEEEEVNEEVESKSKRGCNSEPRKRKKLEMEKLGSDKKCKTEGNIGKAVSKISQNGNASG
LFGLAVNLEREHFTPNTENVLTGDIAERFGNREVEKFCFLGKDRRDAKRRRPGDVDYDPN
TLYLPPDFVNNLTGGQRQWWEFKAKHMDKVLFFKMGKFYELYEMDAHVGTKELDLQYMKG
EQPHCGFPEKNFSMNAEKLARKGYRVLVVEQTETPDQLELRRKKGSKDKVVKREICAVVT
KGTLTEGEMLTIKPDASYMISVTEGFIAYENQKDLLVIGVCTVDVSTSRFMLGQFADDSE
RNSLGSLLSELRPVEIIKPAKRLSSESEKVLLTHTRSPLVNELVPLLEFWSAEKTVAEVR
SIYRRHKDQPVTSKKHIEDSDTNIEDGGSNDLPSVLSGLVNDGERGSYAVSAFGGCLSYL
RKAFLDQSLLKCAKFELLPCSQFRDIPQKPYMILDAAAIENLELFENTRDGSSTGTLYGQ
LNQCVTSFGKRMLKNWLVRPLYLAESIRERQDAVAGCRGDASPHVLEFRKELSKLPDMER
LLGRLFSRSEANGRNANKVVLYEDEAKRQLKEFISALRGCELMTRACSSLSAKLDDVDSS
LLKRLLTPGKDLPDLSQVLKHFKEAFDWIEADQSGRIIPHVGADSEYDSTCEVVKEIESK
LERHLKEQQKVIRDASIKYVSVGKDTYLLEIPESLQGRVPQNYELRSSKKGVRRYWHPDI
KKLLGELSQAESEKESKLKSILQRLIGCFCEHHIRWRQLVSAIAELDVLISLAIVSDYYE
GPTCRPTIIDSPSSSEVPRLCAKSLGHPVLTSDSLGKGAFVPNDVNLGGPGCPSFILLTG
PNMGGKSTLIRQVCIAVILAQLGADVPAEYFEISPVDRIFVRMGAKDHIMSGQSTFLTEL
SETASMLSSATSKSLVALDELGRGTSTSDGQAIAESVLDHFVHKVHCRGLFSTHYHRLAV
DYERDPQVSLCHMGCRVGKESGGVEEVTFLYKLTPGACPKSYGVNVARLAGTPDSVLQKA
AAMSNEFEKVYGKKKLKPTGELSSCNKDENFATLIKELGQFLANFSCPGDSEVKNMSLLC
ELQQTARRLLLQEH
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggctccttcacgtcgtctcagcaatggtagatctccattagtaaacaaacaaagtcaa
atcactgccttcttcactcccggtaagtcaactacttcagtttccccttcttccgctcct
tctgttaaacaaaaccctaaatctactccgccaaaccctaaatctattcccccgaaacct
aaatccaatgattcaaagaaaccccttttagtaattggttctgatgatcatccatctcca
tcaacacctgcttcaaatctaagcagcattaaaacacctgaatctggtaagagattgtat
ggagaaagtgtcatacggaaaagaattagggtttactggcctatagataagcaatggtat
gatgggtttgttaaatcatttgatagtttgagtggtaaacatttgattcagtatgatgat
tctgaagaagaggaattaaatttagagaaagagaagattgaatgggtagaagaagaaaaa
aagactacatttcgtcgcttgaaaaggaatttggcttctgaaaatgttgttttggatgtt
gttgaaaaagaggaggtgaaaagtagttctgggaggtcacgacggggtttgaagatggtg
gtggtggaggatgacgaggaggaggaagggggaagtggaggggatgattcagaagacgag
gattggggaaagaatgttgagaaagagataattgatgatgaaatggaagagatggatttg
gtggaggaggaagaggtaaatgaggaagtagaaagtaaatctaagagagggtgtaattca
gagcctagaaagcgaaagaagttggaaatggagaaattaggttctgacaagaagtgcaaa
actgaggggaatattggtaaagctgtatcaaagatatctcagaatgggaatgctagtgga
ttatttgggctagcagttaatctggagagagagcattttactccaaacacggaaaatgtt
ttaacaggtgatattgctgagcgatttggcaaccgtgaagtggaaaagttttgcttcctt
gggaaagatcgtagggatgctaaaaggagacgccctggagatgttgattatgatccaaac
actctttacttgcctcctgattttgttaacaatttgacaggtggccagaggcaatggtgg
gagttcaaggccaagcatatggacaaggtcttgtttttcaagatgggtaaattctacgaa
ctgtatgaaatggatgcacatgtaggaacaaaagaacttgatttgcaatacatgaaggga
gaacaacctcattgtggatttccagagaagaatttctcaatgaatgcggaaaaattggct
agaaagggctatcgggtgctggttgtagagcagacagaaacacctgatcagcttgaatta
cgtcgcaagaagggttccaaagataaggtagtaaaacgcgaaatatgtgcagtcgttact
aagggtacattgacagagggagaaatgttgacaataaagcctgatgcttcatacatgatt
tcagttacagaaggtttcattgcatatgagaaccaaaaggatctcttagttattggtgtt
tgtactgttgacgtttctacgagcaggtttatgcttgggcagttcgctgatgattcagaa
cgtaattcactgggttccctattgtctgagttaaggcctgtagaaatcataaagccagct
aaacgtctcagttccgaaagtgagaaagttttgttgacacatacgagaagtcctttggtc
aatgagttagttccactcttggagttctggagtgctgaaaaaacagttgctgaagtcaga
agtatatacagacgtcacaaggatcaacctgtaacatcgaagaaacatatagaagattcc
gatactaatattgaagatggtggttcaaatgatttacccagtgttctctctgggctagtg
aacgatggggagcgtggaagttatgcagtttctgcatttggtggttgcctttcctatttg
cgaaaggcttttctggatcaatcactgcttaaatgtgctaagtttgaattattaccgtgc
tcccaatttcgcgatatccctcaaaaaccttatatgattcttgatgcagctgcaattgag
aacctggagttatttgagaacaccagagatggaagttctaccgggacactgtatggtcaa
ctgaatcaatgtgtcacatcatttgggaaacggatgttgaaaaattggcttgtgagacca
ctgtatttggcagagtccatcagggaacgtcaggatgctgtagctggttgtagaggagat
gcttcacctcatgtgcttgaatttcggaaagagttgtccaagcttccagatatggagcga
ttgttgggacgcctcttttctaggagtgaagctaatggaaggaatgcgaataaagtggtt
ctttacgaggacgaagcaaagagacagcttaaagagttcatctctgctttacgcggttgt
gaactaatgactcgtgcatgctcttctcttagtgcaaagttagatgatgtggattctagt
ctgctcaagcgattattgacacctggtaaagatcttcctgacctgagtcaagttctaaag
catttcaaggaagcctttgactggatagaagctgatcagtcgggacgtatcatacctcat
gttggagctgattcagaatatgactctacatgtgaagtcgttaaggaaatcgaatctaaa
ctggaaagacatctaaaggagcaacaaaaagttattcgggatgcatctatcaagtacgtt
agtgttgggaaagacacataccttctagaaatacctgagagtttgcaagggcgagttcct
cagaactatgaattacggtcttcaaaaaagggggttaggaggtattggcatcctgatatt
aagaagctattaggggagctttctcaagctgaatctgagaaggaatctaaactgaaaagc
attttgcagaggttgatcggatgtttttgtgagcatcacattaggtggaggcaattggtc
tccgcaattgctgaattggatgttctgatcagcttggccattgttagcgactactacgaa
ggacccacgtgtcgtccaactatcatagattcaccatcctctagtgaagtgccacggttg
tgcgccaaaagtttaggacatcctgtcctgacaagtgactcactaggcaaaggtgcattt
gttcccaatgatgtaaaccttggtggtcctggatgtcccagctttatcttactcactggt
cccaacatgggcgggaagtcaactcttattcgtcaagtttgcattgccgtgattttggct
cagctaggagcagacgtccctgcagagtactttgaaatatccccagttgatcgtatcttt
gttcggatgggtgcaaaagaccatattatgtcaggccagagtacattcttaactgaactt
tcagagactgcatcaatgctgtcttctgcaaccagtaagtcattggttgcgttggatgaa
ctcggacggggtacatcgacttcagatgggcaagccattgcagaatcagttctagatcat
tttgttcacaaagtacattgccgaggcttgttttctactcactatcaccgtttggcagta
gactacgagagagatccccaggtgtctttgtgccatatgggatgtcgagttgggaaggaa
agcggaggtgttgaagaagttacatttttgtacaaactgacacctggtgcatgtcccaag
agttatggtgtcaatgttgcacggctagcaggtactcctgactctgtgctgcagaaagct
gcagcaatgtctaacgagtttgagaaagtatacgggaagaaaaaacttaagccaacaggg
gagttatcaagttgcaacaaggatgaaaattttgcaaccctaatcaaagaactgggccaa
tttctagccaacttcagttgccctggagattctgaggtcaagaatatgtctttgctgtgt
gaacttcaacaaaccgcacggaggttgcttttgcaggaacactag
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