KEGG   Papaver somniferum (opium poppy): 113348427
Entry
113348427         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113348427
  09124 Replication and repair
   03420 Nucleotide excision repair
    113348427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113348427
   03400 DNA repair and recombination proteins [BR:psom03400]
    113348427
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113348427
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113348427
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 113348427
NCBI-ProteinID: XP_026447976
LinkDB
Position
2:complement(93334784..93337607)
AA seq 229 aa
MAEKGGGGFGFTPSTAKKSSFKQPVAKSAVGGSSKKHKTVQFDTSSESEGSPVANNNNGS
FKSNGKGLFDSSASKGDTDKGGKGGKTGKGWGKSSAPKLPVVVQLEIEKDLPKNAKCMMD
CAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEYAKGSGRYSNPLAVWHALEKLRVLKI
TESELCLISNVCPDTVDEVYALIPSLKTNRLTTEGAIKNLLYELDNLKS
NT seq 690 nt   +upstreamnt  +downstreamnt
atggcggagaaaggaggaggaggattcgggtttacaccatccactgctaaaaaatctagc
tttaaacaacccgtcgctaagtcagcagttggaggttcatcaaagaaacataagacagtg
caatttgatacttcatcagaatctgaaggatcacctgtggctaacaataacaatggttca
ttcaaatcgaatgggaaaggtctctttgattcttctgcttctaaaggggatacggacaaa
ggtgggaaaggaggcaagacaggaaaaggctggggaaaaagcagtgcaccaaaattgcct
gttgttgtacagcttgaaattgaaaaagaccttccaaagaatgccaaatgcatgatggac
tgtgcggcagaagctgctctacaaggaatccaagaccagctatccatactatcacgggat
ccaactattaaactacccttggcatttaacaaagcattggagtatgcaaagggcagtgga
cgatattcaaatcccctggctgtttggcatgccctagaaaagctcagagtactcaaaatt
actgaaagcgagctatgcttgatctcaaatgtatgtcctgatacagttgacgaagtttat
gctcttattccatccttgaagacgaataggctcacgactgaaggagccatcaagaatctg
ctttatgagttggataaccttaaatcctaa

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