Paraclostridium sordellii: RSJ16_08480
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Entry
RSJ16_08480 CDS
T05252
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psor02000
]
RSJ16_08480
01504 Antimicrobial resistance genes [BR:
psor01504
]
RSJ16_08480
Transporters [BR:
psor02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RSJ16_08480
Antimicrobial resistance genes [BR:
psor01504
]
Gene variants
Tetracycline resistance genes
Transporters
RSJ16_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
TRI12
PUCC
DUF6594
Motif
Other DBs
NCBI-ProteinID:
AUN14256
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All DBs
Position
1664086..1665315
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AA seq
409 aa
AA seq
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MLKLNNKQSKEETVNKHALIFGLISVFLCGLGFSIITPVVPFLVQPYISNPSNQAIVVTL
LTSVYAVCVFFAAPGLGALSDRYGRRPLLLVCLLGSAIGYLVFGIGGALWVLFAGRIIEG
ITGGSISTIFAYFADIIPPKKRTKYFGWVSAVAGVGCAIGPTLGGLLAKFGYSIPMYFGA
IITLLNVIYGIVYMPESLDKKNRLKEITFVSLNPFTQLTNILSIKNLKRLLISAFLLWIP
NGSLQAVFSQFTIDTFNWDPALIGLMFSIMGIQDIISQGFIMPKLLKILSDVQIAVLGMT
SEIIGYALIAASALFSFYPLFIGGMFIFGFGDSVFGPSFNGMVSKSVDASEQGRIQGGSQ
SIQALARIIGPIIGGQIYVSLGHSAPAFMGIILIGVAIPVLYKSTNANI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattaaacaacaaacaaagcaaagaagaaaccgtaaataaacatgctctaata
tttgggcttatatctgtatttctttgcggattaggatttagcattataacgcctgtagta
ccatttttagttcaaccttatataagtaatccatcaaatcaagctatagtggttactctt
ttgacatctgtttatgcagtatgcgtgttttttgcagcaccgggacttggagctttaagt
gatagatatggtcgtcgtccattacttttagtatgccttttaggttcagcaatagggtac
ttagtttttggtataggaggagctttatgggtactatttgctggtagaataatagaaggt
ataacaggggggagtataagtactatatttgcatattttgcagatattattcctccaaag
aaaagaactaaatactttggatgggtgagtgcagttgccggtgtaggttgtgctattgga
cctactttaggaggattacttgccaagtttggttattctatacctatgtattttggagca
ataataactttattaaatgttatttatggaatagtctatatgcctgagagtcttgacaag
aaaaatagactaaaggaaattacttttgtaagtctaaatccatttacacaacttacaaat
atactttccataaaaaacttaaaaaggttacttatatcagcttttttactttggatacca
aatggatctttacaggcagttttttcacaatttacaatagatactttcaactgggatcct
gcactaattggacttatgttttcaattatgggtatccaagatattatttcacaaggtttt
ataatgccaaaacttttaaaaatacttagtgatgtacaaatagcagttcttggaatgact
tctgagattatcggttacgctcttattgcagcttcggctttattctcattttatcctctt
tttataggtggaatgtttatatttggttttggtgattctgtttttggaccttcatttaat
ggaatggtttcaaagtctgtagatgctagtgaacagggaaggattcaaggaggtagtcaa
tcgattcaggctttagctaggatcattggtcctattattggaggtcaaatctatgtatca
cttggtcattcagcacctgcttttatggggataatacttataggagttgcaataccagtt
ttgtataagagtacaaatgcaaatatataa
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